RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SLC25A38Q96DW6 304 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 MEPEQ9NQ76 525 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SPHK1Q9NYA1 384 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 MMP17Q9ULZ9 603 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 COPS3Q9UNS2 423 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 CA5BQ9Y2D0 317 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 GNB5O14775 395 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 OGG1O15527 345 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SUSD5O60279 629 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 AGR2O95994 175 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 HLXQ14774 488 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 OR2L3Q8NG85 312 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 OR52E1Q8NGJ3 308 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SYNPRQ8TBG9 265 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 ZCCHC10Q8TBK6 192 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 CNN2Q99439 309 aaKnown RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 SHARPINQ9H0F6 387 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF275Q9NSD4 429 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-203ENST00000374877 PLEKHM1Q9Y4G2 1056 aa10.19□□□□□ -0.78
CCDC40-203ENST00000374877 TP53BP1Q12888 1972 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 PCP4L1A6NKN8 68 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 IFITM5A6NNB3 132 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 KRBOX1C9JBD0 128 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ITGA10O75578 1167 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 COL9A1P20849 921 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 S100A11P31949 105 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ACTA2P62736 377 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ACTG2P63267 376 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 POU4F2Q12837 409 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 TRMT12Q53H54 448 aaKnown RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ADAMTSL4Q6UY14 1074 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 TMPRSS11FQ6ZWK6 438 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF619Q8N2I2 560 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 SPICQ8N5J4 248 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 LCORQ96JN0 433 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 OR1F2PQ96R84 312 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ZCCHC4Q9H5U6 513 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 NTMQ9P121 344 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 SPTBP11277 2137 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ANXA2P2A6NMY6 339 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 PDCD5O14737 125 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 PLRG1O43660 514 aaKnown RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 PRKACAP17612 351 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 TYRP1P17643 537 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 GRPRP30550 384 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 CAPZA2P47755 286 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF273Q14593 569 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ELFN2Q5R3F8 820 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 DCST2Q5T1A1 773 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 SLC35F2Q8IXU6 374 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 STPG2Q8N412 459 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 COX18Q8N8Q8 333 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 THEM6Q8WUY1 208 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 S100A16Q96FQ6 103 aaKnown RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 SEMA4CQ9C0C4 833 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 TAS2R5Q9NYW4 299 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ING1Q9UK53 422 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-203ENST00000374877 FBXL2Q9UKC9 423 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 ACSL5Q9ULC5 683 aa10.18□□□□□ -0.78
CCDC40-203ENST00000374877 IDSB3KWA1 339 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 RLN1P04808 185 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 DBIP07108 87 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 THBS1P07996 1170 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF888P0CJ79 500 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 NID1P14543 1247 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 SEC61A1P61619 476 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 SNRPNP63162 240 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF626Q68DY1 528 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 RPL22L1Q6P5R6 122 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR5M1Q8NGP8 315 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR6K6Q8NGW6 343 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR2L8Q8NGY9 312 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 SLC2A12Q8TD20 617 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ASB12Q8WXK4 309 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 DPYSL5Q9BPU6 564 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF559Q9BR84 538 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 PLEKHA1Q9HB21 404 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 TMEM27Q9HBJ8 222 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 HAO2Q9NYQ3 351 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 KCNE5Q9UJ90 142 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 A0A1W2PP55 124 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 AIPO00170 330 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 PIN1P1O15428 100 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 GALR3O60755 368 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 KDM4BO94953 1096 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 LYPD3O95274 346 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 CPN1P15169 458 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 SLC6A6P31641 620 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 TPMTP51580 245 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 RPS15P62841 145 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 DHODHQ02127 395 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 ARHGAP11AQ6P4F7 1023 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 TMUB2Q71RG4 321 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 OR4K14Q8NGD5 310 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 PTCHD1Q96NR3 888 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 GFI1Q99684 422 aa10.17□□□□□ -0.78
CCDC40-203ENST00000374877 MBNL1Q9NR56 388 aaKnown RBP10.17□□□□□ -0.78
CCDC40-203ENST00000374877 MRPS17Q9Y2R5 130 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms