RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SH2B3Q9UQQ2 575 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 CDC42EP2O14613 210 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 MTX2O75431 263 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 RBBP9O75884 186 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 HOXC4P09017 264 aaPredicted RBP11.88□□□□□ -0.51
PRPF4-201ENST00000374198 CTSHP09668 335 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 ZGLP1P0C6A0 271 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 NQO2P16083 231 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF14P17017 642 aaPredicted RBP11.88□□□□□ -0.51
PRPF4-201ENST00000374198 PDHA2P29803 388 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 MPIP34949 423 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 TRHRP34981 398 aaPredicted RBP11.88□□□□□ -0.51
PRPF4-201ENST00000374198 ACTR1BP42025 376 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 RAB2AP61019 212 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 GFOD2Q3B7J2 385 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SLC29A4Q7RTT9 530 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 LRRTM1Q86UE6 522 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 PARGQ86W56 976 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SMIM19Q96E16 107 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 SLC35G5Q96KT7 338 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 CLCC1Q96S66 551 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 NRIP2Q9BQI9 281 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 EFCAB11Q9BUY7 163 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 ALX4Q9H161 411 aaPredicted RBP11.88□□□□□ -0.51
PRPF4-201ENST00000374198 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
PRPF4-201ENST00000374198 ADGRL4Q9HBW9 690 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 C5AR2Q9P296 337 aa11.88□□□□□ -0.51
PRPF4-201ENST00000374198 OR2AT4A6NND4 320 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF879B4DU55 563 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 C1GALT1C1LP0DN25 315 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 PCBP4P57723 403 aaKnown RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 MEF2AQ02078 507 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 CDK5R1Q15078 307 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 TAF13Q15543 124 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 SSX6Q7RTT6 188 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 LNX2Q8N448 690 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF433Q8N7K0 673 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 SUN3Q8TAQ9 357 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 STOML3Q8TAV4 291 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 OPA3Q9H6K4 179 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 EXO5Q9H790 373 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 MRPS30Q9NP92 439 aaKnown RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 POT1Q9NUX5 634 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 OR5V1Q9UGF6 321 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 ASF1AQ9Y294 204 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 GPR55Q9Y2T6 319 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 MYO10Q9HD67 2058 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 C17orf113A0A1B0GUU1 675 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 GGT3PA6NGU5 568 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 H7C417 338 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 SOX1O00570 391 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 KLKB1P03952 638 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 CATP04040 527 aaKnown RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 CERS1P27544 350 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 LAP3P28838 519 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 HOXC8P31273 242 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 CASRP41180 1078 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 CSNK1EP49674 416 aaKnown RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 MBOAT2Q6ZWT7 520 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 ABHD13Q7L211 337 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 STEAP2Q8NFT2 490 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 OR51S1Q8NGJ8 323 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 WDR34Q96EX3 536 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
PRPF4-201ENST00000374198 C14orf144Q96I85 54 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 C1QTNF2Q9BXJ5 285 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 C1orf198Q9H425 327 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 KLHL31Q9H511 634 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 NOX4Q9NPH5 578 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 MTFP1Q9UDX5 166 aa11.87□□□□□ -0.51
PRPF4-201ENST00000374198 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM202A6NGA9 273 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 NPC1O15118 1278 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 PPIHO43447 177 aaKnown RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 SLC34A2O95436 690 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 PMS2P2O95744 297 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 NPPBP16860 134 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 PJVKQ0ZLH3 352 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 ATXN7L3Q14CW9 347 aaPredicted RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 INPP5JQ15735 1006 aaPredicted RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 LRRC37A5PQ49AS3 106 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 TP53I3Q53FA7 332 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 OR52W1Q6IF63 320 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 UNQ6126/PRO20091Q6UXV3 157 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 IL34Q6ZMJ4 242 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 SLC25A18Q9H1K4 315 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 MEPEQ9NQ76 525 aaPredicted RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 PLXNB3Q9ULL4 1909 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 ACOD1A6NK06 481 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 NPIPB9F8W1W9 429 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 CTNSO60931 367 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 IGSF6O95976 241 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 FRKP42685 505 aaPredicted RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 F2RL1P55085 397 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms