RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 STX1BP61266 288 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 TP53BP2Q13625 1128 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 SPDYE7PQ495Y7 208 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 USP43Q70EL4 1123 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 TRPM8Q7Z2W7 1104 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 ZNF786Q8N393 782 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 OR4F15Q8NGB8 312 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 ZNF563Q8TA94 476 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 MOAP1Q96BY2 351 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 NAA11Q9BSU3 229 aaPredicted RBP12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC52A3Q9NQ40 469 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 ACER3Q9NUN7 267 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 ARL8BQ9NVJ2 186 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 CCDC167Q9P0B6 97 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 PCDHB10Q9UN67 800 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 TGP01266 2768 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 DNAJA2O60884 412 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 AK1P00568 194 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 CSTAP01040 98 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 IL2RGP31785 369 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 FOXG1P55316 489 aaPredicted RBP12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 UBE2NP61088 152 aaKnown RBP12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC25A3Q00325 362 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 SKP2Q13309 424 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 ADIPOQQ15848 244 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 C3orf36Q3SXR2 165 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 PDZK1Q5T2W1 519 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 FAM91A1Q658Y4 838 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 NATD1Q8N6N6 113 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 POMGNT2Q8NAT1 580 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 OR7A2PQ8NGA2 310 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC7A10Q9NS82 523 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 ATP6V1HQ9UI12 483 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 CAPN7Q9Y6W3 813 aa12.9□□□□□ -0.34
CDKN1A-202ENST00000373711 SCAMP2O15127 329 aaKnown RBP12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 PRPS1L1P21108 318 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 CCT3P49368 545 aaKnown RBP12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 POLR2JP52435 117 aaKnown RBP12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 OR2B6P58173 313 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 HILS1P60008 231 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 SPANXN4Q5MJ08 99 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 BLOC1S3Q6QNY0 202 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 VHLLQ6RSH7 139 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 GRINAQ7Z429 371 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 PEG10Q86TG7 708 aaKnown RBP12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 POU5F2Q8N7G0 328 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 SFXN5Q8TD22 340 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 UBASH3BQ8TF42 649 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 OIT3Q8WWZ8 545 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 BOD1Q96IK1 185 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 ARL5BQ96KC2 179 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 ANKRD27Q96NW4 1050 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 ZNF442Q9H7R0 627 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 ZNF696Q9H7X3 374 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 SIRT3Q9NTG7 399 aaPredicted RBP12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 TMEM181Q9P2C4 612 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 FLVCR1Q9Y5Y0 555 aa12.89□□□□□ -0.35
CDKN1A-202ENST00000373711 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 LOC100653049A0A140TA62 436 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 DUXAA6NLW8 204 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 hCG_2039718K7EN88 272 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 SLC22A2O15244 555 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 KRT33AO76009 404 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 KRT34O76011 436 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 UBOX5O94941 541 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 UBTFL6P0CB48 400 aaPredicted RBP12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 LAMP1P11279 417 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 SLC35A1P78382 337 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 CCNIQ14094 377 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 ZNF141Q15928 474 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 TSPO2Q5TGU0 170 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 SNX32Q86XE0 403 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 CCDC103Q8IW40 242 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 NUP37Q8NFH4 326 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 TMEM45BQ96B21 275 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 TMEM186Q96B77 213 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 TESCQ96BS2 214 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 DDIT4LQ96D03 193 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 COQ8BQ96D53 544 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 PCDHGB4Q9UN71 923 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 USP22Q9UPT9 525 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 SPEF1Q9Y4P9 236 aa12.88□□□□□ -0.35
CDKN1A-202ENST00000373711 NR5A2O00482 541 aa12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 STX11O75558 287 aa12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 TFP02787 698 aa12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 T-ENOLP0DO92 83 aa12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 COX4I1P13073 169 aa12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 CDH2P19022 906 aaPredicted RBP12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 NPR2P20594 1047 aa12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 EFNA1P20827 205 aaPredicted RBP12.87□□□□□ -0.35
CDKN1A-202ENST00000373711 NTF4P34130 210 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms