RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 C1SP09871 688 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 MMP12P39900 470 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 PXNP49023 591 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 C9orf135Q5VTT2 229 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 GIMAP1Q8WWP7 306 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 GON7Q9BXV9 100 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 NRIP3Q9NQ35 241 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 KCNIP2Q9NS61 270 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 TRAV36DV7A0A075B6V5 113 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 FZD7O75084 574 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 RELAQ04206 551 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 ZNF91Q05481 1191 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 ATPAF1Q5TC12 328 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 NOX4Q9NPH5 578 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 A0A1W2PPH5 198 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 AQP9O43315 295 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 OR2T7P0C7T2 308 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 LDLRAD1Q5T700 205 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 OR5M10Q6IEU7 315 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 EID2Q8N6I1 236 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 FRMD1Q8N878 549 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 OR2T27Q8NH04 317 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 MITD1Q8WV92 249 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 FCRL1Q96LA6 429 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 SLC46A2Q9BY10 475 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 ZNF355PQ9NSJ1 428 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 PRELID3BQ9Y3B1 194 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 CEPT1Q9Y6K0 416 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 RPS10-NUDT3A0A1W2PQS6 291 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 SERINC4A6NH21 518 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 H3BQ06 376 aaPredicted RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 H7C1Q1 480 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 OIP5O43482 229 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 SIGLEC6O43699 453 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 RPS10P46783 165 aaKnown RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 GIPRP48546 466 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 FBXO27Q8NI29 283 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 ZNF75AQ96N20 296 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 ATOH8Q96SQ7 321 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 COQ3Q9NZJ6 369 aa10.73□□□□□ -0.69
VCL-202ENST00000372755 MRPS28Q9Y2Q9 187 aaKnown RBP10.73□□□□□ -0.69
VCL-202ENST00000372755 RAB19A4D1S5 217 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 RNF4P78317 190 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 BAXQ07812 192 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 MBOAT2Q6ZWT7 520 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ANKLE1Q8NAG6 615 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 GTF2H4Q92759 462 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 SHISA4Q96DD7 197 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ARPC5LQ9BPX5 153 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 B3GAT1Q9P2W7 334 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 MYOM1P52179 1685 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.72□□□□□ -0.69
VCL-202ENST00000372755 PTGER1P34995 402 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 SLC6A11P48066 632 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 DCDP81605 110 aaKnown RBP10.72□□□□□ -0.69
VCL-202ENST00000372755 MFAP5Q13361 173 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ADIPOR2Q86V24 386 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 DHRS4Q9BTZ2 278 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 LRIT2A6NDA9 550 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 MTHFD2P13995 350 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 DPP4P27487 766 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 GABRB3P28472 473 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 GJA5P36382 358 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 OR1D4P47884 311 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ERV3-1Q14264 604 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 HNF4GQ14541 408 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 LTC4SQ16873 150 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 SLC5A12Q1EHB4 618 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 HENMT1Q5T8I9 393 aaKnown RBP10.72□□□□□ -0.69
VCL-202ENST00000372755 HBMQ6B0K9 141 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 NIPAL2Q9H841 368 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 WDR76Q9H967 626 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 SOCS6O14544 535 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 YKT6O15498 198 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 FBXO24O75426 580 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 TUSC2O75896 110 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 HLA-DOBP13765 273 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 HBA1P69905 142 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ACSM1Q08AH1 577 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 TATDN3Q17R31 274 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 PGAP1Q75T13 922 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 DNAJC5GQ8N7S2 189 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 DUSP19Q8WTR2 217 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ALG12Q9BV10 488 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 DECR2Q9NUI1 292 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 PHRF1Q9P1Y6 1649 aaKnown RBP10.72□□□□□ -0.69
VCL-202ENST00000372755 LRP5LA4QPB2 252 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 ZNF814B7Z6K7 855 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 F6UZH7 168 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 EIF1BO60739 113 aaKnown RBP10.72□□□□□ -0.69
VCL-202ENST00000372755 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 LYPD4Q6UWN0 246 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 SKA3Q8IX90 412 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 MRPL43Q8N983 215 aaKnown RBP10.72□□□□□ -0.69
VCL-202ENST00000372755 FER1L6-AS2Q96M78 137 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 KATNB1Q9BVA0 655 aa10.72□□□□□ -0.69
VCL-202ENST00000372755 KCPQ6ZWJ8 1503 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms