RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 THAP7Q9BT49 309 aaPredicted RBP26.4■■□□□ 1.82
SSBP3-204ENST00000371320 IGKV3D-11A0A0A0MRZ8 115 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 CD1AP06126 327 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 GSTT2P0CG29 244 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 GSTT2BP0CG30 244 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 CDKN2AP42771 156 aaKnown RBP26.39■■□□□ 1.82
SSBP3-204ENST00000371320 CCDC85BQ15834 202 aaPredicted RBP26.39■■□□□ 1.82
SSBP3-204ENST00000371320 LYPD4Q6UWN0 246 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 PRR22Q8IZ63 422 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 RFT1Q96AA3 541 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 MVB12AQ96EY5 273 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 GAL3ST4Q96RP7 486 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 MMP25Q9NPA2 562 aa26.39■■□□□ 1.82
SSBP3-204ENST00000371320 NOTOA8MTQ0 251 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 FLRT2O43155 660 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 FZD7O75084 574 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 GATBO75879 557 aaKnown RBP26.38■■□□□ 1.81
SSBP3-204ENST00000371320 DDAH2O95865 285 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 IGKV3-11P04433 115 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 CD14P08571 375 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 MST1P26927 711 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 PSMB10P40306 273 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 RPS11P62280 158 aaKnown RBP eCLIP26.38■■□□□ 1.81
SSBP3-204ENST00000371320 HSF2Q03933 536 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 ALG10Q5BKT4 473 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 ZNF563Q8TA94 476 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 ALG12Q9BV10 488 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 RPRD1BQ9NQG5 326 aaKnown RBP26.38■■□□□ 1.81
SSBP3-204ENST00000371320 FAM171A2A8MVW0 826 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 UCHL1P09936 223 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 CLDN20P56880 219 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 CTXN1P60606 82 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 BCL2A1Q16548 175 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 ZNF721Q8TF20 911 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 ADIPOR1Q96A54 375 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 OR14A2Q96R54 314 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 PDCD1LG2Q9BQ51 273 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.38■■□□□ 1.818e-7■■■□□ 15.9
SSBP3-204ENST00000371320 RANGRFQ9HD47 186 aaPredicted RBP26.38■■□□□ 1.81
SSBP3-204ENST00000371320 SLC6A5Q9Y345 797 aa26.38■■□□□ 1.81
SSBP3-204ENST00000371320 PCDH15Q96QU1 1955 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 C4orf47A7E2U8 309 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 LANCL1O43813 399 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 HOXD12P35452 270 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 CSNK1EP49674 416 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 EGR4Q05215 589 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 SNAP47Q5SQN1 464 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 PRAMEF17Q5VTA0 474 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 FAM122BQ7Z309 247 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 SYT9Q86SS6 491 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 GPR135Q8IZ08 494 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 LRRC75AQ8NAA5 344 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 UPRTQ96BW1 309 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 ALG5Q9Y673 324 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 A0A1B0GVT2 93 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 CPNE3O75131 537 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 APEHP13798 732 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 POU3F3P20264 500 aaPredicted RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 MRPS15P82914 257 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 ELAVL1Q15717 326 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 LINC01590Q5TEZ4 76 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 TMEM53Q6P2H8 277 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 ASB18Q6ZVZ8 466 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 LSM14AQ8ND56 463 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 OR1L3Q8NH93 324 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 ZNF524Q96C55 264 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 MARVELD1Q9BSK0 173 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 TTYH1Q9H313 450 aaPredicted RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 RXFP3Q9NSD7 469 aa26.37■■□□□ 1.81
SSBP3-204ENST00000371320 MRPS17Q9Y2R5 130 aaKnown RBP26.37■■□□□ 1.81
SSBP3-204ENST00000371320 IGHV1OR21-1A0A087WYE8 117 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 ICOSLGO75144 302 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 PIAS2O75928 621 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 ASAH2BP0C7U1 165 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 EPXP11678 715 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 GRPRP30550 384 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 SLC25A1P53007 311 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 PYHIN1Q6K0P9 492 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 OR5H6Q8NGV6 325 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 NUDT9Q9BW91 350 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 FOXQ1Q9C009 403 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 LAT2Q9GZY6 243 aa26.36■■□□□ 1.81
SSBP3-204ENST00000371320 GPRIN2O60269 458 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 TFPIP10646 304 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 ATF1P18846 271 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 TACR3P29371 465 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 SDHAP31040 664 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 RCVRNP35243 200 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 LTBQ06643 244 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 CEP78Q5JTW2 689 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 TRIM63Q969Q1 353 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 ABHD1Q96SE0 405 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 LPAR4Q99677 370 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 BEX2Q9BXY8 128 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 NRSN2Q9GZP1 204 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 ABRACLQ9P1F3 81 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 TEKT2Q9UIF3 430 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 EEF1E1O43324 174 aaKnown RBP26.35■■□□□ 1.81
SSBP3-204ENST00000371320 ORC5O43913 435 aa26.35■■□□□ 1.81
SSBP3-204ENST00000371320 F13BP05160 661 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms