RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NANSQ9NR45 359 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 A4GNTQ9UNA3 340 aa12.27□□□□□ -0.45
SSR4-202ENST00000370085 NOSIPQ9Y314 301 aaKnown RBP12.27□□□□□ -0.45
SSR4-202ENST00000370085 NKX2-6A6NCS4 301 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 hCG_2039718K7EN88 272 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 KPNA4O00629 521 aaPredicted RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 MRPL33O75394 65 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 CIB2O75838 187 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 H1F0P07305 194 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 RNF224P0DH78 156 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 UMPSP11172 480 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 ATP6V1B2P21281 511 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 GRPRP30550 384 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 PMS2P3Q13401 168 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 GUSBP1Q15486 140 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 TAF11Q15544 211 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 FBXL19-AS1Q494R0 122 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 FGD3Q5JSP0 725 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 VWA1Q6PCB0 445 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 PGM2L1Q6PCE3 622 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 ZNF730Q6ZMV8 503 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 BEND4Q6ZU67 534 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 LUZP2Q86TE4 346 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 LIX1LQ8IVB5 337 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 P3H2Q8IVL5 708 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 ZDHHC21Q8IVQ6 265 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 ZNF100Q8IYN0 542 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 TMEM99Q8N816 258 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 RELL2Q8NC24 303 aaPredicted RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 PIK3C3Q8NEB9 887 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 TMEM255BQ8WV15 326 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 C7orf34Q96L11 122 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 SEPHS2Q99611 448 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 PTDSS2Q9BVG9 487 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 RBM24Q9BX46 236 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 CADM1Q9BY67 442 aaKnown RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 YY1AP1Q9H869 796 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 NMNAT1Q9HAN9 279 aaPredicted RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 PLSCR4Q9NRQ2 329 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 ELOVL5Q9NYP7 299 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 NDUFAF4Q9P032 175 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 PLEKHB1Q9UF11 243 aaPredicted RBP12.26□□□□□ -0.45
SSR4-202ENST00000370085 ZNF229Q9UJW7 825 aa12.26□□□□□ -0.45
SSR4-202ENST00000370085 A0A1W2PRQ8 180 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 ENO4A6NNW6 628 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 A8MXE2 369 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 FTCDNL1E5RQL4 147 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 J3KTA2 159 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 M0R082 166 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 LYPD3O95274 346 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 THY1P04216 161 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 ZNF43P17038 809 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 UQCRC1P31930 480 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 VLDLRP98155 873 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 MS4A2Q01362 244 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 FOXD4Q12950 439 aaPredicted RBP12.25□□□□□ -0.45
SSR4-202ENST00000370085 DGCR6Q14129 220 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 SLC17A1Q14916 467 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 POU4F3Q15319 338 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 TSPYL5Q86VY4 417 aaPredicted RBP12.25□□□□□ -0.45
SSR4-202ENST00000370085 SPATA24Q86W54 205 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 NKAIN4Q8IVV8 208 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 FAM86B1Q8N7N1 296 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 OR9K2Q8NGE7 335 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 OR5J2Q8NH18 312 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 ZNF417Q8TAU3 575 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 ACOT11Q8WXI4 607 aaPredicted RBP12.25□□□□□ -0.45
SSR4-202ENST00000370085 SGTBQ96EQ0 304 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 ZNF587Q96SQ5 575 aaPredicted RBP12.25□□□□□ -0.45
SSR4-202ENST00000370085 PRSS27Q9BQR3 290 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 NDEL1Q9GZM8 345 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 C12orf49Q9H741 205 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 MRPL39Q9NYK5 338 aaKnown RBP12.25□□□□□ -0.45
SSR4-202ENST00000370085 JKAMPQ9P055 326 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 RHCGQ9UBD6 479 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 TMCC3Q9ULS5 477 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 POMPQ9Y244 141 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 TMEM5Q9Y2B1 443 aa12.25□□□□□ -0.45
SSR4-202ENST00000370085 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
SSR4-202ENST00000370085 DHRS12A0PJE2 317 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 OR6C65A6NJZ3 312 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 ZNF716A6NP11 495 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 ACOT8O14734 319 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 FZD7O75084 574 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 KRT36O76013 467 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 GADD45GO95257 159 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 CNOT4O95628 575 aaKnown RBP12.24□□□□□ -0.45
SSR4-202ENST00000370085 CLDN1O95832 211 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 CH25HO95992 272 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 BGLAPP02818 100 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 SEMG1P04279 462 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 RAP2AP10114 183 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 PTNP21246 168 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 CBLP22681 906 aa12.24□□□□□ -0.45
SSR4-202ENST00000370085 IFNGR2P38484 337 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms