RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 MFSD9Q8NBP5 474 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 OR4K15Q8NH41 348 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 SLC46A2Q9BY10 475 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 DEFB126Q9BYW3 111 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 NKX6-2Q9C056 277 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 HHATLQ9HCP6 504 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 MUTYHQ9UIF7 546 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 CHST2Q9Y4C5 530 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PMS2P2O95744 297 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 IL33O95760 270 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 IFNA4P05014 189 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PLP2Q04941 152 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 RPE65Q16518 533 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 TECPR1Q7Z6L1 1165 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 ZBTB44Q8NCP5 570 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 ST7LQ8TDW4 575 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 PHYHIPQ92561 330 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 NAA11Q9BSU3 229 aaPredicted RBP14.78□□□□□ -0.04
COL17A1-202ENST00000369733 ATP13A2Q9NQ11 1180 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 EHFQ9NZC4 300 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 STEAP1Q9UHE8 339 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 HS3ST2Q9Y278 367 aa14.78□□□□□ -0.04
COL17A1-202ENST00000369733 K7EPK0 472 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF43P17038 809 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 EPHA1P21709 976 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 NME2P22392 152 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 CLDN2P57739 230 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 RUNX3Q13761 415 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 BCL2A1Q16548 175 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 FAM71E2Q8N5Q1 922 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 INSM2Q96T92 566 aaPredicted RBP14.77□□□□□ -0.04
COL17A1-202ENST00000369733 CSF3RQ99062 836 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 MOKQ9UQ07 419 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 M0QYG6 137 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 CTSAP10619 480 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 GABRR1P24046 479 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 ABHD12BQ7Z5M8 362 aaPredicted RBP14.77□□□□□ -0.04
COL17A1-202ENST00000369733 MFSD4AQ8N468 514 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 HHIPL1Q96JK4 782 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 ARL5BQ96KC2 179 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 ENTPD2Q9Y5L3 495 aa14.77□□□□□ -0.04
COL17A1-202ENST00000369733 H7C1C5 153 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 OR2T1O43869 369 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 KIR2DL3P43628 341 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 LCN6P62502 163 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 TNFRSF17Q02223 184 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 SLC16A12Q6ZSM3 486 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 P4HA3Q7Z4N8 544 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 OR6F1Q8NGZ6 308 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 SENP5Q96HI0 755 aaPredicted RBP14.77□□□□□ -0.05
COL17A1-202ENST00000369733 GPR174Q9BXC1 333 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF160Q9HCG1 818 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 GFOD1Q9NXC2 390 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 HCSTQ9UBK5 93 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 APOBEC3BQ9UH17 382 aaKnown RBP14.77□□□□□ -0.05
COL17A1-202ENST00000369733 HRH3Q9Y5N1 445 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 A0A0J9YY10 115 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF705FA8MVS1 300 aaPredicted RBP14.77□□□□□ -0.05
COL17A1-202ENST00000369733 TNFSF12O43508 249 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF705DP0CH99 300 aaPredicted RBP14.77□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF705BP0CI00 300 aaPredicted RBP14.77□□□□□ -0.05
COL17A1-202ENST00000369733 EBPQ15125 230 aaKnown RBP14.77□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF750Q32MQ0 723 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 RAET1LQ5VY80 246 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 PDXPQ96GD0 296 aa14.77□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF705GA8MUZ8 300 aaPredicted RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 H3BML4 177 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 GABARAPH6UMI1 98 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 THBS2P35442 1172 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 P2RX3P56373 397 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 HMGN3Q15651 99 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF385BQ569K4 471 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 FAM69BQ5VUD6 431 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 NLRC3Q7RTR2 1065 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 TMEM200AQ86VY9 491 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ZSCAN4Q8NAM6 433 aaPredicted RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 HAS2Q92819 552 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 BCORQ6W2J9 1755 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 M0R082 166 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 SURF4O15260 269 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 LGI1O95970 557 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ALKBH1Q13686 389 aaKnown RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 OR52I2Q8NH67 350 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 UQCC2Q9BRT2 126 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ISYNA1Q9NPH2 558 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 TRPM3Q9HCF6 1732 aaPredicted RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF593O00488 134 aaPredicted RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 OR7A5Q15622 319 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 SLC35D2Q76EJ3 337 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 OVCH1Q7RTY7 1134 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 NKAIN4Q8IVV8 208 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 TMEM99Q8N816 258 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 MAP6Q96JE9 813 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 TCEAL2Q9H3H9 227 aaPredicted RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 POFUT1Q9H488 388 aa14.76□□□□□ -0.05
COL17A1-202ENST00000369733 ZC3H12DA2A288 527 aaKnown RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 KDM4EB2RXH2 506 aaPredicted RBP14.76□□□□□ -0.05
COL17A1-202ENST00000369733 F5H5K5 113 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms