RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 FLVCR1Q9Y5Y0 555 aa8.72□□□□□ -1.01
CD48-202ENST00000368046 TRAV36DV7A0A075B6V5 113 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 CCT8L1PA6NM43 557 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 DEFB108AA8MXU0 73 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 NDUFAB1O14561 156 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 IL32P24001 234 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 EDNRAP25101 427 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 PRDX6P30041 224 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 DNAJA1P31689 397 aaKnown RBP8.71□□□□□ -1.02
CD48-202ENST00000368046 P2RY4P51582 365 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 CRYBA2P53672 197 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 CDH12P55289 794 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 MFSD13AQ14CX5 517 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 POU4F3Q15319 338 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 ENTPD8Q5MY95 495 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 FAM69AQ5T7M9 428 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 C8orf82Q6P1X6 216 aaPredicted RBP8.71□□□□□ -1.02
CD48-202ENST00000368046 HACD2Q6Y1H2 254 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 CREB3L2Q70SY1 520 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 GPAT4Q86UL3 456 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 RBM45Q8IUH3 476 aaKnown RBP8.71□□□□□ -1.02
CD48-202ENST00000368046 UBE2J2Q8N2K1 259 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 OR2T12Q8NG77 320 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 PROX1Q92786 737 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 NINJ1Q92982 152 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 KISS1RQ969F8 398 aaPredicted RBP8.71□□□□□ -1.02
CD48-202ENST00000368046 TMEM45BQ96B21 275 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 S100PBPQ96BU1 408 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 EPYCQ99645 322 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 PTDSS2Q9BVG9 487 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 ASB6Q9NWX5 421 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 C6orf203Q9P0P8 240 aaPredicted RBP8.71□□□□□ -1.02
CD48-202ENST00000368046 ITGB1BP2Q9UKP3 347 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 USP22Q9UPT9 525 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 B3GALT5Q9Y2C3 310 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 SLC9A8Q9Y2E8 581 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 SH3GLB1Q9Y371 365 aa8.71□□□□□ -1.02
CD48-202ENST00000368046 CSMD2Q7Z408 3487 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 IGKV1D-42A0A075B6H8 117 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 LOC102725191A0A1B0GVB3 256 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 FAM220BPB1ANY3 271 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 M0R3H8 397 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 FZD7O75084 574 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 IGHV1-2P23083 117 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 SELENOWP63302 87 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 LIPEQ05469 1076 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 FAPQ12884 760 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 TSC22D1Q15714 1073 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 TAB1Q15750 504 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 NPTX1Q15818 432 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 BEX5Q5H9J7 111 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 H1FNTQ75WM6 255 aaPredicted RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 BHLHA15Q7RTS1 189 aaPredicted RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 SSX8Q7RTT4 187 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 AAED1Q7RTV5 226 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 P2RY8Q86VZ1 359 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 LSRQ86X29 649 aaPredicted RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 MICU2Q8IYU8 434 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 ZNF433Q8N7K0 673 aaPredicted RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 OR9K2Q8NGE7 335 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 OR4D11Q8NGI4 311 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 VANGL1Q8TAA9 524 aaPredicted RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 ADAMTS16Q8TE57 1224 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 NRGNQ92686 78 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 PIK3IP1Q96FE7 263 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 MPP4Q96JB8 637 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 MUS81Q96NY9 551 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 OXGR1Q96P68 337 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 ZNF385AQ96PM9 386 aaKnown RBP8.7□□□□□ -1.02
CD48-202ENST00000368046 TMEM43Q9BTV4 400 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 PCDHAC1Q9H158 963 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 NGBQ9NPG2 151 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 UPB1Q9UBR1 384 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 ST6GALNAC2Q9UJ37 374 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 ARL2BPQ9Y2Y0 163 aa8.7□□□□□ -1.02
CD48-202ENST00000368046 A0A1W2PPR1 153 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 CIB4A0PJX0 185 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 TRAPPC13A5PLN9 417 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 CPSF4LA6NMK7 179 aaKnown RBP8.69□□□□□ -1.02
CD48-202ENST00000368046 MS4A18H0YCH9 400 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 SIAH2O43255 324 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 CHP2O43745 196 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 LYZL6O75951 148 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 IGHV3-9P01782 118 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 THY1P04216 161 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 ZNF43P17038 809 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 GGT1P19440 569 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 COX5AP20674 150 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 DNASE1P24855 282 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 GTF2E2P29084 291 aaKnown RBP8.69□□□□□ -1.02
CD48-202ENST00000368046 GRPRP30550 384 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 NUDT2P50583 147 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 IST1P53990 364 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 NR1H2P55055 460 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 LTBQ06643 244 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 GABRA6Q16445 453 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 MS4A18Q3C1V0 323 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 CYBRD1Q53TN4 286 aa8.69□□□□□ -1.02
CD48-202ENST00000368046 TIMM23BQ5SRD1 257 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms