RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SDHBP21912 280 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 PSMA6P60900 246 aaKnown RBP10.7□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM215Q68D42 235 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM71Q6P5X7 295 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 HAO2Q9NYQ3 351 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 COPZ2Q9P299 210 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 PCDHGA1Q9Y5H4 931 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 CASP8AP2Q9UKL3 1982 aa10.7□□□□□ -0.7
SYNE1-204ENST00000367248 ACOT8O14734 319 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 RAD52P43351 418 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SLC10A1Q14973 349 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ARSKQ6UWY0 536 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF683Q8IZ20 524 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SPARTQ8N0X7 666 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF566Q969W8 418 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 B3GNT2Q9NY97 397 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 CCDC59Q9P031 241 aaKnown RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 OR6C70A6NIJ9 312 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 H0YIG0 161 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ACP2P11117 423 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 NME1P15531 152 aaKnown RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 POLR2IP36954 125 aaKnown RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ACTBP60709 375 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ACTG1P63261 375 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 PUDPQ08623 228 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 LRRC56Q8IYG6 542 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 TOMM40LQ969M1 308 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 IP6K3Q96PC2 410 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 C21orf33P30042 268 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 TBCEQ15813 527 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ANKRD34AQ69YU3 496 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF813Q6ZN06 617 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 GDF7Q7Z4P5 450 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 CAMKMTQ7Z624 323 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SPRED1Q7Z699 444 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 CA13Q8N1Q1 262 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 EDARQ9UNE0 448 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 B3GNT3Q9Y2A9 372 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 A0A1B0GUL6 1792 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 FPR3P25089 353 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 PLEKHN1Q494U1 663 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ACSM3Q53FZ2 586 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SLC41A2Q96JW4 573 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 RBMX2Q9Y388 322 aaKnown RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 PPICP45877 212 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 BIDP55957 195 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 CD83Q01151 205 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SMN1Q16637 294 aaKnown RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SLC35D2Q76EJ3 337 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 OR5AS1Q8N127 324 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 TP53I13Q8NBR0 393 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SLC25A43Q8WUT9 341 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 GGHQ92820 318 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 CACNG6Q9BXT2 260 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 YARS2Q9Y2Z4 477 aaKnown RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ABHD16AO95870 558 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 COMTD1Q86VU5 262 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 SCCPDHQ8NBX0 429 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ASB17Q8WXJ9 295 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 CD300AQ9UGN4 299 aa10.69□□□□□ -0.7
SYNE1-204ENST00000367248 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
SYNE1-204ENST00000367248 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 TNFSF12O43508 249 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GPRIN2O60269 458 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 HES1Q14469 280 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM205Q6UW68 189 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 DLEU7Q6UYE1 221 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 KCTD20Q7Z5Y7 419 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF709Q8N972 641 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 AK6Q9Y3D8 172 aaKnown RBP10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF587BE7ETH6 402 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 SBK3P0C264 359 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 BCKDHBP21953 392 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 BSGP35613 385 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 FAM53BQ14153 422 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 NTRK2Q16620 822 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 CREB3L1Q96BA8 519 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 TMIGD2Q96BF3 282 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 TAAR9Q96RI9 348 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 CITED4Q96RK1 184 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF350Q9GZX5 532 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 MOKQ9UQ07 419 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 M0R1B8 84 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GNB2P62879 340 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 SLC46A3Q7Z3Q1 461 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GRINAQ7Z429 371 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 LILRA2Q8N149 483 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 OR11L1Q8NGX0 322 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GAB3Q8WWW8 586 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 GABRG3Q99928 467 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 SYT4Q9H2B2 425 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 NARFLQ9H6Q4 476 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 RABL2AQ9UBK7 228 aaPredicted RBP10.68□□□□□ -0.7
SYNE1-204ENST00000367248 RABL2BQ9UNT1 228 aa10.68□□□□□ -0.7
SYNE1-204ENST00000367248 TPRP12270 2363 aaKnown RBP10.68□□□□□ -0.7
SYNE1-204ENST00000367248 ANKRD34BA5PLL1 514 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms