RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 HOXB5P09067 269 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 LIPCP11150 499 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 UBE2G2P60604 165 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CPNE4Q96A23 557 aaPredicted RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 HDAC8Q9BY41 377 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 BABAM2Q9NXR7 383 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 ANXA7P20073 488 aaKnown RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 TLCD2A6NGC4 264 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 TMEM212A6NML5 194 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 PRRG2O14669 202 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 ACP2P11117 423 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 GLB1P16278 677 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 HOXD9P28356 352 aaPredicted RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 FOXA1P55317 472 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 RACK1P63244 317 aaKnown RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 SRPXP78539 464 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 C2orf76Q3KRA6 126 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC46A3Q7Z3Q1 461 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 ZFP82Q8N141 532 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 ASB11Q8WXH4 323 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 NUDT9Q9BW91 350 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 OR51J1Q9H342 316 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CNOT2Q9NZN8 540 aaKnown RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 TMEM221A6NGB7 291 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CNIH1O95406 144 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CDK4P11802 303 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 ATPAF1Q5TC12 328 aaPredicted RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC46A1Q96NT5 459 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 SAV1Q9H4B6 383 aaPredicted RBP14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 C12orf49Q9H741 205 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 C1GALT1Q9NS00 363 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 C1orf123Q9NWV4 160 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CA5AP35218 305 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 CD300LGQ6UXG3 332 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 GDPD3Q7L5L3 318 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 WDR5BQ86VZ2 330 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC38A1Q9H2H9 487 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 KCNIP2Q9NS61 270 aa14.6□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC22A23A1A5C7 686 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 PRDX3P30048 256 aaKnown RBP14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 BIDP55957 195 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SNRPD2P62316 118 aaKnown RBP14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 GAB1Q13480 694 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 MPPED2Q15777 294 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SYT13Q7L8C5 426 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 METTL4Q8N3J2 472 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC35G3Q8N808 338 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 PRDM9Q9NQV7 894 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 F10P00742 488 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 ITGAMP11215 1152 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 TBPP20226 339 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 GMPRP36959 345 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 HBG1P69891 147 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 HBG2P69892 147 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 RBMS3Q6XE24 437 aaKnown RBP14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 CLEC14AQ86T13 490 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 FAM109AQ8N4B1 249 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 BPIFB2Q8N4F0 458 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 THOC3Q96J01 351 aaKnown RBP14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 ZNF75AQ96N20 296 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 CDCP1Q9H5V8 836 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SMCO4Q9NRQ5 59 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 FGF21Q9NSA1 209 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 TMEM181Q9P2C4 612 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 ANKRD26Q9UPS8 1709 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 BOLA2-SMG1P6H3BVE0 249 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 HLA-AP01891 365 aaKnown RBP14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 HLA-FP30511 346 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 ADAMTSL4Q6UY14 1074 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 FRMD1Q8N878 549 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 TMEM185AQ8NFB2 350 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 CMTM2Q8TAZ6 248 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 PPA2Q9H2U2 334 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 PLEKHM1Q9Y4G2 1056 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 F6UZH7 168 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 MT-ND4P03905 459 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SHEQ5VZ18 495 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 PIANPQ8IYJ0 282 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 OR8J2Q8NGG1 315 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 GINS3Q9BRX5 216 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SHARPINQ9H0F6 387 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 CLMPQ9H6B4 373 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 PRDM4Q9UKN5 801 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 MRPS28Q9Y2Q9 187 aaKnown RBP14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 HS3ST3A1Q9Y663 406 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 ARNTLO00327 626 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 ALOX12BO75342 701 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 CD27P26842 260 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 SYPL1Q16563 259 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 APH1AQ96BI3 265 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 NIPAL2Q9H841 368 aa14.59□□□□□ -0.07
NUCKS1-201ENST00000367142 AGAP14A8MT82 685 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 ARAFP10398 606 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 NFATC3Q12968 1075 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 SLC9A3R2Q15599 337 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 OR13C2Q8NGS9 318 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 PAQR8Q8TEZ7 354 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 LHX3Q9UBR4 397 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 RASD1Q9Y272 281 aa14.58□□□□□ -0.07
NUCKS1-201ENST00000367142 PHRF1Q9P1Y6 1649 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms