RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZDHHC1Q8WTX9 485 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 ST8SIA2Q92186 375 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 RGP1Q92546 391 aaPredicted RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 HSPA12BQ96MM6 686 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 GAL3ST1Q99999 423 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 KCNK15Q9H427 330 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 NCDNQ9UBB6 729 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 OR5V1Q9UGF6 321 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 ING1Q9UK53 422 aaPredicted RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 TBC1D3KA0A087X1G2 549 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 TBC1D3BA6NDS4 549 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 TBC1D3FA6NER0 549 aaPredicted RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 TOR1AO14656 332 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 PDCD5O14737 125 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 P2RX6O15547 441 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 PTP4A3O75365 173 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 ZFPL1O95159 310 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 APOC3P02656 99 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 GABRA3P34903 492 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 RPL4P36578 427 aaKnown RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 HTRA4P83105 476 aaPredicted RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 FGL2Q14314 439 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 ZNF273Q14593 569 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 GRM7Q14831 915 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 CSRP2Q16527 193 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 TBC1D3GQ6DHY5 549 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 OR7E24Q6IFN5 339 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 TMPRSS11FQ6ZWK6 438 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 SMARCD2Q92925 531 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 RASD2Q96D21 266 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 AIFM2Q9BRQ8 373 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 PITHD1Q9GZP4 211 aaPredicted RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 ZNF350Q9GZX5 532 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 KIF25Q9UIL4 384 aa12.47□□□□□ -0.41
PRKN-205ENST00000366897 MRPS2Q9Y399 296 aaKnown RBP12.47□□□□□ -0.41
PRKN-205ENST00000366897 GABARAPH6UMI1 98 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 EML2O95834 649 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 SERPINA3P01011 423 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 FOSL2P15408 326 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 EMDP50402 254 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 CBFBQ13951 182 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 FAM69AQ5T7M9 428 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 OR2L13Q8N349 312 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 TEX19Q8NA77 164 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 ZNF511Q8NB15 262 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 TMEM52Q8NDY8 209 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 OR5T3Q8NGG3 340 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 STK35Q8TDR2 534 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 ZNF707Q96C28 371 aaPredicted RBP12.46□□□□□ -0.41
PRKN-205ENST00000366897 SGTBQ96EQ0 304 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 CNN2Q99439 309 aaKnown RBP12.46□□□□□ -0.41
PRKN-205ENST00000366897 SHARPINQ9H0F6 387 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 DEC1Q9P2X7 70 aa12.46□□□□□ -0.41
PRKN-205ENST00000366897 F5P12259 2224 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 LINC01553A4QN01 128 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 H0YC42 278 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 GALR3O60755 368 aaPredicted RBP12.46□□□□□ -0.42
PRKN-205ENST00000366897 IFNGR1P15260 489 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 PRKACAP17612 351 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 PPP2CBP62714 309 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 PPP2CAP67775 309 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 ACTC1P68032 377 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 ACTA1P68133 377 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 GUCA2AQ02747 115 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 FHL1Q13642 323 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 NNATQ16517 81 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 PWWP2BQ6NUJ5 590 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 ZNF613Q6PF04 617 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 TMUB2Q71RG4 321 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 HDDC2Q7Z4H3 204 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 SUSD6Q92537 303 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 DNAJA3Q96EY1 480 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 CD93Q9NPY3 652 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 PRSS16Q9NQE7 514 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 FOXJ3Q9UPW0 622 aa12.46□□□□□ -0.42
PRKN-205ENST00000366897 OR2M5A3KFT3 312 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 EPOPA6NHQ4 379 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 CT62P0C5K7 136 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 CPMP14384 443 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 GLULP15104 373 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 S100A11P31949 105 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 DRD3P35462 400 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 SEC61A1P61619 476 aaKnown RBP12.45□□□□□ -0.42
PRKN-205ENST00000366897 LRFN4Q6PJG9 635 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 RD3Q7Z3Z2 195 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 OR4N2Q8NGD1 307 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 ACSL5Q9ULC5 683 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 MOKQ9UQ07 419 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 AIPO00170 330 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 GOSR2O14653 212 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 CTDSPLO15194 276 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 DBIP07108 87 aaKnown RBP12.45□□□□□ -0.42
PRKN-205ENST00000366897 GIPP09681 153 aaPredicted RBP12.45□□□□□ -0.42
PRKN-205ENST00000366897 OR8G3PP0DMU2 310 aa12.45□□□□□ -0.42
PRKN-205ENST00000366897 FNTBP49356 437 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms