RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HTR3CQ8WXA8 447 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 DEDD2Q8WXF8 326 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 OSTF1Q92882 214 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 SEC22AQ96IW7 307 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 NIPSNAP3BQ9BS92 247 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 RWDD1Q9H446 243 aaPredicted RBP2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF226Q9NYT6 803 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 CHRNA9Q9UGM1 479 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 MROH7-TTC4A0A0A0MT08 1334 aa2.39□□□□□ -2.03
RNU4-28P-201ENST00000364739 KDRP35968 1356 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 GPRASP1Q5JY77 1395 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 LRP5LA4QPB2 252 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 NPIPA7E9PJI5 369 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 UGT1A9O60656 530 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 PFKFB2O60825 505 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 DIRAS3O95661 229 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 RHOXF2BP0C7M4 288 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 NPIPA8P0DM63 369 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 COX5AP20674 150 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 GPM6AP51674 278 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 PKNOX1P55347 436 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 CSTF1Q05048 431 aaKnown RBP2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 TMEM41BQ5BJD5 291 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 LY6G6FQ5SQ64 297 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 LCN12Q6JVE5 192 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 MOB3BQ86TA1 216 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 CLEC4FQ8N1N0 589 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 SPRYD4Q8WW59 207 aaPredicted RBP2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 FRZBQ92765 325 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 AMDHD1Q96NU7 426 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 TMEM246Q9BRR3 403 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 DNTTIP1Q9H147 329 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 SRMSQ9H3Y6 488 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 SEC14L3Q9UDX4 400 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 OPN4Q9UHM6 478 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 NPIPA1Q9UND3 350 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 RASD1Q9Y272 281 aa2.38□□□□□ -2.03
RNU4-28P-201ENST00000364739 IGLV11-55A0A075B6I3 123 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 COLCA2A8K830 154 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 ENTPD5O75356 428 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 CTDNEP1O95476 244 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 AK1P00568 194 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 HNF1AP20823 631 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 CNR1P21554 472 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 MMP11P24347 488 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 HTR2AP28223 471 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 SPIBQ01892 262 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 SCGB2A2Q13296 93 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 ABCA11PQ4W5N1 156 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 SAMD4BQ5PRF9 694 aaKnown RBP2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 NCR3LG1Q68D85 454 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 CNSTQ6PJW8 725 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 LYPD1Q8N2G4 141 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 RAET1EQ8TD07 263 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 MCOLN3Q8TDD5 553 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZFP90Q8TF47 636 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 PHF10Q8WUB8 498 aaKnown RBP2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 PELI1Q96FA3 418 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 ITCHQ96J02 903 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 DEFB127Q9H1M4 99 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 ELOVL3Q9HB03 270 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 SLCO1B3Q9NPD5 702 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 INPP5EQ9NRR6 644 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 PCYOX1Q9UHG3 505 aa2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 YTHDF2Q9Y5A9 579 aaKnown RBP2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 SF3B1O75533 1304 aaKnown RBP eCLIP2.37□□□□□ -2.03
RNU4-28P-201ENST00000364739 TRIOBPQ9H2D6 2365 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 A0A1W2PNV4 684 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 N4BP1O75113 896 aaKnown RBP2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 TLX1NBP0CAT3 122 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 GCAP28676 217 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 TDO2P48775 406 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 PDIA2Q13087 525 aaKnown RBP2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 GUCA2BQ16661 112 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 C5orf47Q569G3 176 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 TMEM255AQ5JRV8 349 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 PYHIN1Q6K0P9 492 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 DNAJC19Q96DA6 116 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 SH3YL1Q96HL8 342 aaPredicted RBP2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF416Q9BWM5 594 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 RBKSQ9H477 322 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF430Q9H8G1 570 aaPredicted RBP2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 THUMPD1Q9NXG2 353 aaKnown RBP2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 ATP8B3O60423 1300 aa2.36□□□□□ -2.03
RNU4-28P-201ENST00000364739 TUBGCP6Q96RT7 1819 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 A0A0U1RQS6 177 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 RGS16O15492 202 aaPredicted RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 TAPBPO15533 448 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 ADCY5O95622 1261 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 NCF1P14598 390 aaPredicted RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF14P17017 642 aaPredicted RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 PAX7P23759 505 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 GNMTQ14749 295 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 STK11Q15831 433 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 INAQ16352 499 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 MICBQ29980 383 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 OR52E8Q6IFG1 317 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 C1orf94Q6P1W5 598 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 SLC25A34Q6PIV7 304 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF836Q6ZNA1 936 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms