RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 IPMKQ8NFU5 416 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 WFIKKN1Q96NZ8 548 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZNF382Q96SR6 550 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 RIOK2Q9BVS4 552 aaKnown RBP0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 CNIH4Q9P003 139 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 DNAJB9Q9UBS3 223 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 STX8Q9UNK0 236 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 PSMA7O14818 248 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 CALB2P22676 271 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 ANXA13P27216 316 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 CXCL12P48061 93 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 MYBPC1Q00872 1141 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 CASP12Q6UXS9 341 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 KDM7AQ6ZMT4 941 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 KCTD9Q7L273 389 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 TCF24Q7RTU0 167 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 ADM2Q7Z4H4 148 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZSCAN30Q86W11 494 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 LEMD2Q8NC56 503 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 LINC01560Q8TB33 94 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 RPL3LQ92901 407 aaKnown RBP0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 DNAJC19Q96DA6 116 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 PKMYT1Q99640 499 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 TMEM106BQ9NUM4 274 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 C1orf123Q9NWV4 160 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 QPCTLQ9NXS2 382 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 ALG6Q9Y672 507 aa0.08□□□□□ -2.4
RNU6-238P-201ENST00000363313 ADAMTS13Q76LX8 1427 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 H0Y626 953 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 KIF2AO00139 706 aaPredicted RBP0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 OR56A5P0C7T3 313 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 GSTT2P0CG29 244 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 GSTT2BP0CG30 244 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 ANXA3P12429 323 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 ABOP16442 354 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 SHMT2P34897 504 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 DEFB103AP81534 67 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 RABL6Q3YEC7 729 aaPredicted RBP0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 PARP15Q460N3 678 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 FAM78AQ5JUQ0 283 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 AP1ARQ63HQ0 302 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 Q6ZSA8 131 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 MIER3Q7Z3K6 550 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 BATF2Q8N1L9 274 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 KLF14Q8TD94 323 aaPredicted RBP0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 RNASE8Q8TDE3 154 aaKnown RBP0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 FBXW2Q9UKT8 454 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 SPACA6W5XKT8 324 aa0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 PHF3Q92576 2039 aaKnown RBP0.07□□□□□ -2.4
RNU6-238P-201ENST00000363313 CCDC69A6NI79 296 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 XPO1O14980 1071 aaKnown RBP0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 HLA-DQA1P01909 254 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 PRPS2P11908 318 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 PRB3Q04118 309 aaPredicted RBP0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 ASPHQ12797 758 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 PDIA5Q14554 519 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 C11orf88Q6PI97 169 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 CES3Q6UWW8 571 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 NLRP9Q7RTR0 991 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 VSIG1Q86XK7 387 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 FBXL13Q8NEE6 735 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 OR5M1Q8NGP8 315 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 M1APQ8TC57 530 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 ACOT11Q8WXI4 607 aaPredicted RBP0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 PAGE5Q96GU1 130 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 SEC22AQ96IW7 307 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 MAF1Q9H063 256 aa0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 DDX19AQ9NUU7 478 aaKnown RBP0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 F11RQ9Y624 299 aaKnown RBP0.06□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZNF320A2RRD8 509 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 FAM74A7A6NL05 159 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 DCTN6O00399 190 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 RHOBTB1O94844 696 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZNF250P15622 560 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CNR1P21554 472 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 YWHABP31946 246 aaKnown RBP0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CYB561P49447 251 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 ARG2P78540 354 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 FUT5Q11128 374 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 PPP1R8Q12972 351 aaKnown RBP0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CARTPTQ16568 116 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 FAM74A3Q4VXF1 159 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 ATL3Q6DD88 541 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CNTN4Q8IWV2 1026 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 LINC01561Q8N1V8 128 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 TMEM105Q8N8V8 129 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CCDC89Q8N998 374 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CNIH3Q8TBE1 160 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 TSSK3Q96PN8 268 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZNF607Q96SK3 696 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 NAT9Q9BTE0 207 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CACNG6Q9BXT2 260 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 POLR1EQ9GZS1 481 aaKnown RBP0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 CNOT2Q9NZN8 540 aaKnown RBP0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 SIGLEC7Q9Y286 467 aa0.05□□□□□ -2.4
RNU6-238P-201ENST00000363313 IGHV3-74A0A0B4J1X5 117 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 ANKRD30BLA7E2S9 258 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 WASH3PC4AMC7 463 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 C3orf84H3BNL1 204 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 BPY2O14599 106 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms