RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 OTPQ5XKR4 325 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 SIX5Q8N196 739 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 C7orf57Q8NEG2 295 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 OR7G1Q8NGA0 311 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 OR4D9Q8NGE8 314 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 OR5H6Q8NGV6 325 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 OR2T27Q8NH04 317 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 TRMT10AQ8TBZ6 339 aaKnown RBP12.49□□□□□ -0.41
XRCC6-201ENST00000359308 CAPSLQ8WWF8 208 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 SMIM19Q96E16 107 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 ST6GAL2Q96JF0 529 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 LCORQ96JN0 433 aaPredicted RBP12.49□□□□□ -0.41
XRCC6-201ENST00000359308 PELOQ9BRX2 385 aaKnown RBP12.49□□□□□ -0.41
XRCC6-201ENST00000359308 RNF121Q9H920 327 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 MMP25Q9NPA2 562 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 EPHA6Q9UF33 1036 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 DCTN6O00399 190 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 HCRTR2O43614 444 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 HLA-DQB1P01920 261 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 GGTLC2Q14390 218 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 ZSWIM7Q19AV6 140 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 RNASE12Q5GAN4 147 aaKnown RBP12.49□□□□□ -0.41
XRCC6-201ENST00000359308 C1QL3Q5VWW1 255 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 ZNF57Q68EA5 555 aaPredicted RBP12.49□□□□□ -0.41
XRCC6-201ENST00000359308 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 ASB18Q6ZVZ8 466 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 MARCH3Q86UD3 253 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 POMGNT2Q8NAT1 580 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 OR14A16Q8NHC5 309 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 HSD17B8Q92506 261 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 SLC46A1Q96NT5 459 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 NMNAT2Q9BZQ4 307 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
XRCC6-201ENST00000359308 NOX1Q9Y5S8 564 aa12.49□□□□□ -0.41
XRCC6-201ENST00000359308 TRBV2A0A0J9YWF9 115 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 LYRM1O43325 122 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 SLC19A2O60779 497 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 CPNE3O75131 537 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 EDNRAP25101 427 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 RPS27P42677 84 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 RPS5P46782 204 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 CTXN1P60606 82 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 RPS11P62280 158 aaKnown RBP eCLIP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 SIRPAP78324 504 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 DMWDQ09019 674 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 QPRTQ15274 297 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 CDONQ4KMG0 1287 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ALG10Q5BKT4 473 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 METAP1DQ6UB28 335 aaPredicted RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 PAMR1Q6UXH9 720 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ESPNLQ6ZVH7 1005 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 UPRTQ96BW1 309 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 LPAR4Q99677 370 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 NUDT22Q9BRQ3 303 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 HDHD2Q9H0R4 259 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 NPAP1Q9NZP6 1156 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 CTSFQ9UBX1 484 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ADAM30Q9UKF2 790 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 N6AMT1Q9Y5N5 214 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 IGHV3-20A0A0C4DH32 117 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 FRG2CA6NGY1 282 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ARPC3O15145 178 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 SNRPBP14678 240 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ATF1P18846 271 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 FBLP22087 321 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 INPP1P49441 399 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 GBX2P52951 348 aaPredicted RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 RAB25P57735 213 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 PRPS1P60891 318 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ACTA2P62736 377 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ACTG2P63267 376 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 RPL18Q07020 188 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 EBPQ15125 230 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 SF3B4Q15427 424 aaKnown RBP eCLIP12.48□□□□□ -0.417e-8■■■■□ 26.4
XRCC6-201ENST00000359308 SMAD2Q15796 467 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ZNF440Q8IYI8 595 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 FRMD6Q96NE9 622 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 FYTTD1Q96QD9 318 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 AK6Q9Y3D8 172 aaKnown RBP12.48□□□□□ -0.41
XRCC6-201ENST00000359308 MMACHCQ9Y4U1 282 aa12.48□□□□□ -0.41
XRCC6-201ENST00000359308 NUDT14O95848 222 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 GPANK1O95872 356 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 RAB3BP20337 219 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 SDHBP21912 280 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 ITPKBP27987 946 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 GALNSP34059 522 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 EPHA4P54764 986 aa12.47□□□□□ -0.41
XRCC6-201ENST00000359308 NANOS3P60323 173 aaKnown RBP12.47□□□□□ -0.41
XRCC6-201ENST00000359308 LGALS3BPQ08380 585 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms