RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 PRAMEF27A3QJZ7 478 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 HLA-HP01893 362 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 HLA-DOBP13765 273 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 HTR1FP30939 366 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 HCCSP53701 268 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 ATPAF1Q5TC12 328 aaPredicted RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 AADACL3Q5VUY0 350 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 PRAMEF9Q5VWM5 478 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 OR10K2Q6IF99 312 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 SLC41A2Q96JW4 573 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 OR2A25A4D2G3 310 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 CHRM4P08173 479 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 ECI1P42126 302 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 TSFMP43897 325 aaKnown RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 CLDN12P56749 244 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 EXOSC7Q15024 291 aaKnown RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 NLGN4YQ8NFZ3 816 aaPredicted RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 SLC35B4Q969S0 331 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 OR5M11Q96RB7 305 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 VN1R3Q9BXE9 311 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 ACTL7AQ9Y615 435 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 ANKRD34BA5PLL1 514 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 HSD17B7P56937 341 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 HIST2H3AQ71DI3 136 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 BAGE3Q86Y29 109 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 BAGE2Q86Y30 109 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 C15orf54Q8N8G6 183 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 RNF170Q96K19 258 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 BOLA1Q9Y3E2 137 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 OTX2P32243 289 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 CHRNEQ04844 493 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 CTSL3PQ5NE16 218 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 MRPL2Q5T653 305 aaKnown RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 SLX4IPQ5VYV7 408 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 ZNF765Q7L2R6 523 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 ULBP2Q9BZM5 246 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 C20orf85Q9H1P6 137 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP98-203ENST00000359171 ADAM12O43184 909 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 LDB3O75112 727 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 NFYBP25208 207 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 LAP3P28838 519 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 NAA40Q86UY6 237 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 NKX3-1Q99801 234 aaPredicted RBP13.53□□□□□ -0.24
NUP98-203ENST00000359171 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
NUP98-203ENST00000359171 TMEM200CA6NKL6 621 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 FAM227AF5H4B4 570 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 DDAH2O95865 285 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 ZNF728P0DKX0 622 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 CD53P19397 219 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 HABP2Q14520 560 aaPredicted RBP13.52□□□□□ -0.24
NUP98-203ENST00000359171 ADPRMQ3LIE5 342 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 LIPIQ6XZB0 460 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 SHPRHQ149N8 1683 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.24
NUP98-203ENST00000359171 OR7C1O76099 320 aaPredicted RBP13.52□□□□□ -0.24
NUP98-203ENST00000359171 TNFSF4P23510 183 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 TACR3P29371 465 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 SNCAP37840 140 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 BDH1Q02338 343 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 OR6M1Q8NGM8 313 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 SEC22CQ9BRL7 303 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.24
NUP98-203ENST00000359171 MUTYHQ9UIF7 546 aa13.52□□□□□ -0.24
NUP98-203ENST00000359171 EXO1Q9UQ84 846 aaKnown RBP13.52□□□□□ -0.24
NUP98-203ENST00000359171 MRPS28Q9Y2Q9 187 aaKnown RBP13.52□□□□□ -0.24
NUP98-203ENST00000359171 TMEM72A0PK05 275 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 C1orf105O95561 183 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 CBX7O95931 251 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 NAGAP17050 411 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 OMGP23515 440 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 FLI1Q01543 452 aaPredicted RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 KIAA0141Q14154 515 aaPredicted RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 OXA1LQ15070 435 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 FAM57BQ71RH2 274 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 MCATQ8IVS2 390 aaKnown RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 OR52H1Q8NGJ2 320 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 OR10R2Q8NGX6 335 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 ENKD1Q9H0I2 346 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 TIMP2P16035 220 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 LIPAP38571 399 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 CAMK2BQ13554 666 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 HNRNPA1L2Q32P51 320 aaKnown RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 PAN3Q58A45 887 aaKnown RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 TMEM201Q5SNT2 666 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 SLC38A5Q8WUX1 472 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 UBL7Q96S82 380 aaPredicted RBP13.52□□□□□ -0.25
NUP98-203ENST00000359171 CPT2P23786 658 aa13.52□□□□□ -0.25
NUP98-203ENST00000359171 FPR3P25089 353 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms