RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TPTEP56180 551 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 RPL27P61353 136 aaKnown RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 TSPAN31Q12999 210 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PIN1Q13526 163 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PAPD5Q8NDF8 572 aaKnown RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 OR51A7Q8NH64 312 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 COPS4Q9BT78 406 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ASF1BQ9NVP2 202 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 OR2M5A3KFT3 312 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 FCMRO60667 390 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 OSMP13725 252 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ACADSP16219 412 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 S1PR1P21453 382 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 NR1H2P55055 460 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 Q0VFX4 171 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PODNL1Q6PEZ8 512 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ZNF808Q8N4W9 903 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 ZNF283Q8N7M2 679 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ROBO4Q8WZ75 1007 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 SLC25A37Q9NYZ2 338 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 OSGIN1Q9UJX0 560 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ZNF223Q9UK11 482 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 KCNE3Q9Y6H6 103 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ABCA7Q8IZY2 2146 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 A0A0B4J2E0 115 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 A0A1B0GX12 115 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 TUBAL3A6NHL2 446 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 SLC22A31A6NKX4 558 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 SOCS2O14508 198 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 LRRTM2O43300 516 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PPP1R3DO95685 299 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 BMP5P22003 454 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 CCNOP22674 350 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 MSX2P35548 267 aaPredicted RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 MLLT10P55197 1068 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 DMTNQ08495 405 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 KRR1Q13601 381 aaKnown RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 LRRC36Q1X8D7 754 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 VTCN1Q7Z7D3 282 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 AMIGO2Q86SJ2 522 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 FBXL14Q8N1E6 418 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 SLCO5A1Q9H2Y9 848 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 FBXL2Q9UKC9 423 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 ZNF346Q9UL40 294 aaKnown RBP8.3□□□□□ -1.08
UPF2-202ENST00000357604 ERGIC3Q9Y282 383 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 PMF1-BGLAPU3KQ54 211 aa8.3□□□□□ -1.08
UPF2-202ENST00000357604 FANCMQ8IYD8 2048 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 A0A087WUJ7 227 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 TLE1Q04724 770 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 P2RY8Q86VZ1 359 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 CALHM3Q86XJ0 350 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 CANT1Q8WVQ1 401 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 CNN2Q99439 309 aaKnown RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 OR51V1Q9H2C8 321 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 SERHL2Q9H4I8 314 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 NMNAT1Q9HAN9 279 aaPredicted RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 NDRG4Q9ULP0 352 aaKnown RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 DTX4Q9Y2E6 619 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 PRKNO60260 465 aaPredicted RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 ZNF20P17024 532 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 GSSP48637 474 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ALDH3A2P51648 485 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ZNF813Q6ZN06 617 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 TMEM200AQ86VY9 491 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 FADS6Q8N9I5 356 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 HSD17B8Q92506 261 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 PCDHB16Q9NRJ7 776 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ARMC1Q9NVT9 282 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 USE1Q9NZ43 259 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 SLAMF8Q9P0V8 285 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 IGLV3-32A0A0A0MS00 114 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 PRSS44E7EML9 344 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 SPARCP09486 303 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 CCDC159P0C7I6 412 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 CFL1P23528 166 aaKnown RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 CRISP1P54107 249 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 FOXL2P58012 376 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 MRPS15P82914 257 aaKnown RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 DUSP2Q05923 314 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 PDK3Q15120 406 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 EFCAB10A6NFE3 127 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ZNF724A8MTY0 619 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 M0R082 166 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 M0R1B8 84 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 FZD7O75084 574 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 GBX2P52951 348 aaPredicted RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 HOXC5Q00444 222 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 TMED1Q13445 227 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 NDUFAF6Q330K2 333 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 IQCCQ4KMZ1 466 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 ARSKQ6UWY0 536 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 RASSF6Q6ZTQ3 369 aa8.29□□□□□ -1.08
UPF2-202ENST00000357604 PIWIL3Q7Z3Z3 882 aaKnown RBP8.29□□□□□ -1.08
UPF2-202ENST00000357604 ARHGEF39Q8N4T4 335 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms