RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 CREB3L2Q70SY1 520 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 LINGO2Q7L985 606 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 RAB8BQ92930 207 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 TUBGCP3Q96CW5 907 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 NEURL3Q96EH8 262 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZIM3Q96PE6 472 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 TRNT1Q96Q11 434 aaKnown RBP7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 KCNS3Q9BQ31 491 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 MECRQ9BV79 373 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 SLC38A1Q9H2H9 487 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 NELFAQ9H3P2 528 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 MTHFD2LQ9H903 347 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 MOV10Q9HCE1 1003 aaKnown RBP7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 PCDHB14Q9Y5E9 798 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
COL4A3BP-202ENST00000357457 CFAP73A6NFT4 308 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 VSTM5A8MXK1 200 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZNF587BE7ETH6 402 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 RPL36A-HNRNPH2H7BZ11 118 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 hCG_2039718K7EN88 272 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 HMGN4O00479 90 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 NR5A2O00482 541 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 SPRY1O43609 319 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 SNUPNO95149 360 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 LGI1O95970 557 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 CBR1P16152 277 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 CDH2P19022 906 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 NPR2P20594 1047 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 RPS4Y1P22090 263 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 APEX1P27695 318 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 THBS4P35443 961 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 SRP14P37108 136 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 SELENOPP49908 381 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 UBE2NP61088 152 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 EPS8Q12929 822 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 CASP8Q14790 479 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 ANXA8L1Q5VT79 327 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 LRRC74BQ6ZQY2 392 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZCCHC23Q6ZST2 131 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 LSRQ86X29 649 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 EPHX4Q8IUS5 362 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZCCHC24Q8N2G6 241 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 EIF1ADQ8N9N8 165 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 SEMA6DQ8NFY4 1073 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 OR4A15Q8NGL6 344 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 AGR3Q8TD06 166 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 UBASH3BQ8TF42 649 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 ANKRD27Q96NW4 1050 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 LINC00470Q9BZP3 86 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 NOP53Q9NZM5 478 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZNF232Q9UNY5 417 aa7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-202ENST00000357457 B4DSR2 109 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 NPIPB7O75200 414 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 UPK3AO75631 287 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 ZNF432O94892 652 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 CPSF4O95639 269 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 C1QCP02747 245 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 ERCC1P07992 297 aaPredicted RBP7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 CHRM4P08173 479 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 NUDT17P0C025 328 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 EGR1P18146 543 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 PCMT1P22061 227 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 CXCR1P25024 350 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 ACAA2P42765 397 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 EVX1P49640 407 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 SH3BGRP55822 239 aaPredicted RBP7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 TXNL4AP83876 142 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 LGALS3BPQ08380 585 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 OR7A5Q15622 319 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 TRIP10Q15642 601 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 SYPL1Q16563 259 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 FAM174BQ3ZCQ3 159 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 GPAT3Q53EU6 434 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 TMEM225Q6GV28 225 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 VHLLQ6RSH7 139 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 HMGN2P46Q86SG4 172 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 GPAT4Q86UL3 456 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 ANKRD46Q86W74 232 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 ANKFN1Q8N957 763 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 VPS37AQ8NEZ2 397 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 IL17RDQ8NFM7 739 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 EPS8L3Q8TE67 593 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 WDR60Q8WVS4 1066 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 TESCQ96BS2 214 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 APOPT1Q96IL0 206 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 DPY30Q9C005 99 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 RACGAP1Q9H0H5 632 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 AKTIPQ9H8T0 292 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 SLC17A7Q9P2U7 560 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 RASD1Q9Y272 281 aa7.41□□□□□ -1.22
COL4A3BP-202ENST00000357457 TGP01266 2768 aa7.4□□□□□ -1.22
COL4A3BP-202ENST00000357457 A0A096LPE4 126 aa7.4□□□□□ -1.22
COL4A3BP-202ENST00000357457 IGHV2OR16-5A0A0B4J2B6 119 aa7.4□□□□□ -1.22
COL4A3BP-202ENST00000357457 A0A1W2PPZ6 126 aa7.4□□□□□ -1.22
COL4A3BP-202ENST00000357457 TMEM89A2RUT3 159 aa7.4□□□□□ -1.22
COL4A3BP-202ENST00000357457 A8MVM7 634 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms