RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KIR2DS5A0A0G2JLQ3 304 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 A0A0G2JNG1 304 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 KIR2DS3K7RE56 304 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 TRAF3IP2O43734 574 aaPredicted RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 NUDT21O43809 227 aaKnown RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 ABOP16442 354 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 SPINT3P49223 89 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 P2RX1P51575 399 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 KIR2DS5Q14953 304 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 VAMP3Q15836 100 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 PLCXD3Q63HM9 321 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 C5orf46Q6UWT4 87 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 RTL10Q7L3V2 364 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 SIAH3Q8IW03 269 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 MFSD6LQ8IWD5 586 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 UTP4Q969X6 686 aaKnown RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 IL17FQ96PD4 163 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 TMEM269A0A1B0GVZ9 245 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 PRICKLE3O43900 615 aaPredicted RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 CSNK1A1P48729 337 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 SLC14A2Q15849 920 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 AADACL3Q5VUY0 350 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 KDF1Q8NAX2 398 aaPredicted RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 NPRL2Q8WTW4 380 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 GAR1Q9NY12 217 aaKnown RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 ZNF728P0DKX0 622 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 CD79AP11912 226 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 RAB5AP20339 215 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 DPP4P27487 766 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 SLC10A2Q12908 348 aaPredicted RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 RPE65Q16518 533 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 Q499Y3 187 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 PIP5KL1Q5T9C9 394 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 WBP2NLQ6ICG8 309 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 ADAM5Q6NVV9 412 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 FAM185AQ8N0U4 392 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 PSMF1Q92530 271 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 FAM122AQ96E09 287 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 OR7D2Q96RA2 312 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 TAF9BQ9HBM6 251 aa11.98□□□□□ -0.49
SMC4-202ENST00000357388 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
SMC4-202ENST00000357388 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 IL1RNP18510 177 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SERPINA2P20848 420 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 TACR3P29371 465 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 IL2RGP31785 369 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SLC1A3P43003 542 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 PRR18Q8N4B5 295 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 NKAIN3Q8N8D7 197 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 NLGN4YQ8NFZ3 816 aaPredicted RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 GALNT9Q9HCQ5 603 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 F5H5K5 113 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SORBS2O94875 1100 aaKnown RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 ATP1B1P05026 303 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SIM1P81133 766 aaPredicted RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 ARL16Q0P5N6 197 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 FAM174AQ8TBP5 190 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 LGALS14Q8TCE9 139 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 C12orf57Q99622 126 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 GJD2Q9UKL4 321 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 ZNF443Q9Y2A4 671 aaPredicted RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 A0A0J9YY10 115 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 GABARAPH6UMI1 98 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 TIMP1P01033 207 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 HPNP05981 417 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 CD46P15529 392 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 RPS25P62851 125 aaKnown RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 SUMO1P63165 101 aaKnown RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 KIR2DS3Q14952 304 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 LGI3Q8N145 548 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 APH1BQ8WW43 257 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 MUCL1Q96DR8 90 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 HRASLS5Q96KN8 279 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 CTRCQ99895 268 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 TMEM59Q9BXS4 323 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 NOX4Q9NPH5 578 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 PTRH2Q9Y3E5 179 aaKnown RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 H7BYZ3 331 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SNCGO76070 127 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 RGS11O94810 467 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 HOXA1P49639 335 aaPredicted RBP11.97□□□□□ -0.49
SMC4-202ENST00000357388 CHRNEQ04844 493 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 GAB1Q13480 694 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 LRRC26Q2I0M4 334 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 VASNQ6EMK4 673 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 ELOVL3Q9HB03 270 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 RNF150Q9ULK6 438 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 LGALS8O00214 317 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SLC16A6O15403 523 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 TXNDC12O95881 172 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SPP1P10451 314 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 IDUAP35475 653 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 SPRED3Q2MJR0 410 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 NXNL2Q5VZ03 156 aa11.97□□□□□ -0.49
SMC4-202ENST00000357388 ANGPTL6Q8NI99 470 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms