RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FCRL1Q96LA6 429 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 KATNB1Q9BVA0 655 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF286AQ9HBT8 521 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 ASF1BQ9NVP2 202 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 NDUFAF4Q9P032 175 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 TP53TG5Q9Y2B4 290 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 TMEM129A0AVI4 362 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 SLC5A10A0PJK1 596 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 RNF212BA8MTL3 300 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
COL9A1-202ENST00000357250 SPDEFO95238 335 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 CNOT4O95628 575 aaKnown RBP10.9□□□□□ -0.66
COL9A1-202ENST00000357250 MT-ATP6P00846 226 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 PVRP15151 417 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 MSX1P28360 303 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 MSMO1Q15800 293 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 LHX8Q68G74 356 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 MFSD12Q6NUT3 480 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 CLEC1AQ8NC01 280 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 IL17RDQ8NFM7 739 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 ST6GALNAC5Q9BVH7 336 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 RLIMQ9NVW2 624 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 LRFN1Q9P244 771 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 ATPIF1Q9UII2 106 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 SLC22A23A1A5C7 686 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 HMX2A2RU54 273 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 SSX5O60225 188 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 GYPBP06028 91 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 CD14P08571 375 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 MTHFD2P13995 350 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 FXYD4P59646 89 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 DPTQ07507 201 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 LEXMQ3ZCV2 418 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 YOD1Q5VVQ6 348 aaPredicted RBP10.9□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF585AQ6P3V2 769 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 CD300LGQ6UXG3 332 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 STK35Q8TDR2 534 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 TCTEX1D2Q8WW35 142 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 MACROD1Q9BQ69 325 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 GABARAPL1Q9H0R8 117 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 PLCXD1Q9NUJ7 323 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 RCE1Q9Y256 329 aa10.9□□□□□ -0.66
COL9A1-202ENST00000357250 TLCD2A6NGC4 264 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 TARM1B6A8C7 271 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 GFYI3L273 518 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 HCRTR1O43613 425 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 TK1P04183 234 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 PTGER1P34995 402 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 ECI1P42126 302 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 VASNQ6EMK4 673 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 LPCAT3Q6P1A2 487 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 FCRLAQ7L513 359 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 TTC3P53804 2025 aa10.9□□□□□ -0.67
COL9A1-202ENST00000357250 BMP1P13497 986 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ARNTP27540 789 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SSTR4P31391 388 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 LUMP51884 338 aaPredicted RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 OR7E24Q6IFN5 339 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SFXN4Q6P4A7 337 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 DHRS4L2Q6PKH6 230 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 UPRTQ96BW1 309 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 MICU1Q9BPX6 476 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 VN1R3Q9BXE9 311 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SDHAF2Q9NX18 166 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 LUZP4Q9P127 313 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 COL24A1Q17RW2 1714 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 A0A1B0GWA3 101 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 KLK8O60259 260 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 EIF4E2O60573 245 aaKnown RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SNAPINO95295 136 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 THBS1P07996 1170 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ZDHHC11BP0C7U3 371 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 CD53P19397 219 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SNU13P55769 128 aaKnown RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 EEF1A1P68104 462 aaKnown RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 FOXK2Q01167 660 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 DUSP6Q16828 381 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 UBE2UQ5VVX9 321 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 METRNLQ641Q3 311 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 DLEU7Q6UYE1 221 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 LANCL3Q6ZV70 420 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 CAMKMTQ7Z624 323 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ABHD4Q8TB40 342 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF566Q969W8 418 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 PDXPQ96GD0 296 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 AP1S3Q96PC3 154 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 STARD5Q9NSY2 213 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 GHRLQ9UBU3 117 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ATG4BQ9Y4P1 393 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SUSD5O60279 629 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ITGB2P05107 769 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 CD79AP11912 226 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 TACR3P29371 465 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ARL3P36405 182 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SLC22A6Q4U2R8 563 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ARSJQ5FYB0 599 aaPredicted RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 APOOLQ6UXV4 268 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 GHSRQ92847 366 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms