RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 C10orf53Q8N6V4 93 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 Q8N9G6 341 aaPredicted RBP20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 GATSQ8NAP1 163 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 OR13C5Q8NGS8 318 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 MOSPD2Q8NHP6 518 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 RASD2Q96D21 266 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 CMTM3Q96MX0 182 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 LMF1Q96S06 567 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 NXF5Q9H1B4 397 aaKnown RBP20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 ALG5Q9Y673 324 aa20.32■□□□□ 0.84
NKX2-1-201ENST00000354822 SELENOFO60613 162 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 TMEM127O75204 238 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 OR2B3O76000 313 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 SLC6A1P30531 599 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 SLC6A8P48029 635 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 CCR4P51679 360 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 RPS11P62280 158 aaKnown RBP eCLIP20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 BTG1P62324 171 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 UBXN2BQ14CS0 331 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 DEFB133Q30KQ1 61 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 LEG1Q6P5S2 330 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 TTLL10Q6ZVT0 673 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 HAVCR2Q8TDQ0 301 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNRF4Q8WWF5 429 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 TRIM63Q969Q1 353 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 CLIP3Q96DZ5 547 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 TTTY10Q9BZA0 68 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 MMP25Q9NPA2 562 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 RABL2AQ9UBK7 228 aaPredicted RBP20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 RABL2BQ9UNT1 228 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 HEATR5AQ86XA9 2040 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 PAHP00439 452 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 AQP2P41181 271 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 CDK10Q15131 360 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 ALG10Q5BKT4 473 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 EMC4Q5J8M3 183 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 CEP78Q5JTW2 689 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 SLC6A19Q695T7 634 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 BAIAP2L2Q6UXY1 529 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 UPRTQ96BW1 309 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 ALG12Q9BV10 488 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 LAT2Q9GZY6 243 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 COPS3Q9UNS2 423 aa20.31■□□□□ 0.84
NKX2-1-201ENST00000354822 TEX13CA0A0J9YWL9 993 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 INMT-MINDY4F8WBC2 141 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 MAGEB4O15481 346 aaPredicted RBP20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 HYAL3O43820 417 aaPredicted RBP20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 UBL3O95164 117 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 TXNDC12O95881 172 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 TACSTD2P09758 323 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 SDHAP31040 664 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 GPR176Q14439 515 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 HSD17B12Q53GQ0 312 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 LINC01590Q5TEZ4 76 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 FAM122BQ7Z309 247 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 GPR135Q8IZ08 494 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 LRRC75AQ8NAA5 344 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 RPS4Y2Q8TD47 263 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 Q96M85 177 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 OR8D2Q9GZM6 311 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 RXFP3Q9NSD7 469 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 ACOXLQ9NUZ1 547 aa20.3■□□□□ 0.84
NKX2-1-201ENST00000354822 IGKV3D-11A0A0A0MRZ8 115 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 IGKV3-11P04433 115 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ASAH2BP0C7U1 165 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 MAOBP27338 520 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 CDKN2AP42771 156 aaKnown RBP20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 CTXN1P60606 82 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 HSD11B2P80365 405 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 GXYLT1Q4G148 440 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 CBLN3Q6UW01 205 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 GLCCI1Q86VQ1 547 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 SLC35F3Q8IY50 421 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ABHD1Q96SE0 405 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ABCG5Q9H222 651 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 H3BMH7 237 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 CPNE3O75131 537 aaKnown RBP20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 S100A1P23297 94 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ARL4DP49703 201 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 RAB25P57735 213 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 CD83Q01151 205 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ELAVL1Q15717 326 aaKnown RBP20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 NKAIN2Q5VXU1 208 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 APOOLQ6UXV4 268 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 SLC16A9Q7RTY1 509 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNF321PQ8N8H1 164 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNF563Q8TA94 476 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ZPLD1Q8TCW7 415 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ADIPOR1Q96A54 375 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 FYTTD1Q96QD9 318 aaKnown RBP20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 SPATA2Q9UM82 520 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNF281Q9Y2X9 895 aa20.29■□□□□ 0.84
NKX2-1-201ENST00000354822 PDCD5O14737 125 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 OIP5O43482 229 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ATF1P18846 271 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 OR1D4P47884 311 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 MMP15P51511 669 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 MRPL28Q13084 256 aaKnown RBP20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 YIF1BQ5BJH7 314 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ASB18Q6ZVZ8 466 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms