RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PRPS1P60891 318 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 TUBA1BP68363 451 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 TUBA4AP68366 448 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 GSTA3Q16772 222 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 TBRG1Q3YBR2 411 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 RNF220Q5VTB9 566 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 CREB3L2Q70SY1 520 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 TUBA1AQ71U36 451 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 DEPDC4Q8N2C3 294 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 TRIML2Q8N7C3 387 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 POMGNT2Q8NAT1 580 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 OR52P1PQ8NH57 321 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 PROX1Q92786 737 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 C3orf49Q96BT1 292 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 FBXO17Q96EF6 278 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 MAELQ96JY0 434 aaKnown RBP13.82□□□□□ -0.2
PDGFA-201ENST00000354513 ALKBH3Q96Q83 286 aaPredicted RBP13.82□□□□□ -0.2
PDGFA-201ENST00000354513 PTDSS2Q9BVG9 487 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 FKRPQ9H9S5 495 aa13.82□□□□□ -0.2
PDGFA-201ENST00000354513 SLC35F4A4IF30 521 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 SLCO1B7G3V0H7 640 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 NR5A2O00482 541 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 UPK3AO75631 287 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 F12P00748 615 aaPredicted RBP13.81□□□□□ -0.2
PDGFA-201ENST00000354513 IFNA2P01563 188 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 HOXB9P17482 250 aaPredicted RBP13.81□□□□□ -0.2
PDGFA-201ENST00000354513 CDH2P19022 906 aaPredicted RBP13.81□□□□□ -0.2
PDGFA-201ENST00000354513 IGFBP5P24593 272 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 GNGT1P63211 74 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 TGFBR3Q03167 851 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 EGR4Q05215 589 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 KRTAP24-1Q3LI83 254 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 LIN52Q52LA3 116 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 PDCD4Q53EL6 469 aaKnown RBP13.81□□□□□ -0.2
PDGFA-201ENST00000354513 C1QTNF12Q5T7M4 302 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 SERPINA11Q86U17 422 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 GPAT4Q86UL3 456 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 PEX5LQ8IYB4 626 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 ZNF440Q8IYI8 595 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 CADM2Q8N3J6 435 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 SLC38A5Q8WUX1 472 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 BCL2L2Q92843 193 aaPredicted RBP13.81□□□□□ -0.2
PDGFA-201ENST00000354513 TMEM19Q96HH6 336 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 SLC38A2Q96QD8 506 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 PRR14Q9BWN1 585 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 PIF1Q9H611 641 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 FGFR1OP2Q9NVK5 253 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 ADPRHL2Q9NX46 363 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 CRNNQ9UBG3 495 aaPredicted RBP13.81□□□□□ -0.2
PDGFA-201ENST00000354513 P2RX2Q9UBL9 471 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 SEC14L4Q9UDX3 406 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 CDC42EP3Q9UKI2 254 aa13.81□□□□□ -0.2
PDGFA-201ENST00000354513 ARPC4-TTLL3A0A0A6YYG9 625 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 ZNF503-AS2A6NEH8 195 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 A8MVM7 634 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 RFXANKO14593 260 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 HDAC3O15379 428 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 KRT75O95678 551 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 WNT11O96014 354 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 IGLV1-44P01699 117 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 CSF3P09919 207 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 USF1P22415 310 aaPredicted RBP13.8□□□□□ -0.2
PDGFA-201ENST00000354513 CXCR1P25024 350 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 CALCRP30988 508 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 ANXA11P50995 505 aaKnown RBP13.8□□□□□ -0.2
PDGFA-201ENST00000354513 DSTNP60981 165 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 CHRNB3Q05901 458 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 GNA13Q14344 377 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 SLC9B1Q4ZJI4 515 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 C1orf140Q5VVS0 124 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 WBP2NLQ6ICG8 309 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 IL17RELQ6ZVW7 336 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 COMTD1Q86VU5 262 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 ANKS4BQ8N8V4 417 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 OR9I1Q8NGQ6 314 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 B3GAT1Q9P2W7 334 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
PDGFA-201ENST00000354513 IGHV4-61A0A0C4DH41 118 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 TRPC5OSA6NMA1 111 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 ZNF432O94892 652 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 IGFBP1P08833 259 aaPredicted RBP13.79□□□□□ -0.2
PDGFA-201ENST00000354513 CELA3BP08861 270 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 NUDT7P0C024 238 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 CECR9P0C854 216 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 PNMTP11086 282 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 UQCRBP14927 111 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 LSP1P33241 339 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 NR4A2P43354 598 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 LSM11P83369 360 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDGFA-201ENST00000354513 HOXC5Q00444 222 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 NAAAQ02083 359 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 ADIPOQQ15848 244 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 CYB5R2Q6BCY4 276 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 KDM8Q8N371 416 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
PDGFA-201ENST00000354513 TMEM158Q8WZ71 300 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 THOC1Q96FV9 657 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms