RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 S1PR1P21453 382 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ACVR1BP36896 505 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CCR6P51684 374 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 SLC16A1P53985 500 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CCNJQ5T5M9 372 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 FCRLBQ6BAA4 426 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 TMEM71Q6P5X7 295 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ZC3H14Q6PJT7 736 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 THSD4Q6ZMP0 1018 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 PRSS42Q7Z5A4 293 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 PXKQ7Z7A4 578 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 SYT9Q86SS6 491 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 SIAH3Q8IW03 269 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR4D9Q8NGE8 314 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR13C5Q8NGS8 318 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR51Q1Q8NH59 317 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 IFI44Q8TCB0 444 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 YIPF5Q969M3 257 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 C4orf36Q96KX1 117 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 PGLYRP3Q96LB9 341 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 TEAD3Q99594 435 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR51J1Q9H342 316 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF768Q9H5H4 540 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 EMC7Q9NPA0 242 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 FGF21Q9NSA1 209 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CUTCQ9NTM9 273 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 FBXO34Q9NWN3 711 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 MRPL39Q9NYK5 338 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF292O60281 2723 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 PCNX3Q9H6A9 2034 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 A0A0B4J203 849 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 LINC00862A6NCI5 91 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 UNC119BA6NIH7 251 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 J3QLW9 94 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 MT-ND5P03915 603 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 RAF1P04049 648 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 GKN3PP0CG01 181 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 PNLIPP16233 465 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF19P17023 458 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 HTR2AP28223 471 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 NOS3P29474 1203 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CLDN6P56747 220 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR12D2P58182 307 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 DGCR2P98153 550 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 PLA2G2CQ5R387 149 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 C1orf189Q5VU69 101 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CD276Q5ZPR3 534 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 MFSD12Q6NUT3 480 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ESPNLQ6ZVH7 1005 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 TPRA1Q86W33 373 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR2L13Q8N349 312 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 LNX2Q8N448 690 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 TOMM5Q8N4H5 51 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 BEST4Q8NFU0 473 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR6C4Q8NGE1 309 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CEP76Q8TAP6 659 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 CTHRC1Q96CG8 243 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ARSGQ96EG1 525 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ZFP3Q96NJ6 502 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 SMAD5Q99717 465 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 NDC1Q9BTX1 674 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 OR51V1Q9H2C8 321 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 LRRN3Q9H3W5 708 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 FN3KQ9H479 309 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 MTHFD2LQ9H903 347 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 AKIRIN1Q9H9L7 192 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 LANCL2Q9NS86 450 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 SLC22A11Q9NSA0 550 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 GLTPQ9NZD2 209 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 NTMQ9P121 344 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 EIF3KQ9UBQ5 218 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF223Q9UK11 482 aaPredicted RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 FBXL4Q9UKA2 621 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 TMEM5Q9Y2B1 443 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 DTX4Q9Y2E6 619 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 MRPS7Q9Y2R9 242 aaKnown RBP7.87□□□□□ -1.15
TRIM55-204ENST00000353317 WDR45Q9Y484 360 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 NUBP2Q9Y5Y2 271 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 HEATR5AQ86XA9 2040 aa7.87□□□□□ -1.15
TRIM55-204ENST00000353317 NUP210LQ5VU65 1888 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 A0A1W2PPK0 400 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 CDX4O14627 284 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ATP1B1P05026 303 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 TPOP07202 933 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ANKRD34CP0C6C1 535 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 BMP7P18075 431 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 TLX1P31314 330 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 RPS7P62081 194 aaKnown RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 EEF1A1P68104 462 aaKnown RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 FOXK2Q01167 660 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 ZNF85Q03923 595 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 SQSTM1Q13501 440 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 GPR68Q15743 365 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 MAPK14Q16539 360 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 GSG1Q2KHT4 349 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 LGALSLQ3ZCW2 172 aaPredicted RBP7.86□□□□□ -1.15
TRIM55-204ENST00000353317 VWA2Q5GFL6 755 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 MTFR2Q6P444 385 aa7.86□□□□□ -1.15
TRIM55-204ENST00000353317 DBX2Q6ZNG2 339 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms