RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SNRPD1P62314 119 aaKnown RBP13.96□□□□□ -0.17
PTBP1-201ENST00000349038 SKP1P63208 163 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 SQSTM1Q13501 440 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 NIPAL3Q6P499 406 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 TAF8Q7Z7C8 310 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 TM4SF18Q96CE8 201 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 SLC25A38Q96DW6 304 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 ZNF649Q9BS31 505 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 CHMP1AQ9HD42 196 aaPredicted RBP13.96□□□□□ -0.17
PTBP1-201ENST00000349038 A4GALTQ9NPC4 353 aa13.96□□□□□ -0.17
PTBP1-201ENST00000349038 ANAPC1Q9H1A4 1944 aa13.96□□□□□ -0.18
PTBP1-201ENST00000349038 TXNDC12O95881 172 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 RPL4P36578 427 aaKnown RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 POU4F2Q12837 409 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ZC3H14Q6PJT7 736 aaKnown RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ZNF620Q6ZNG0 422 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 PNPLA2Q96AD5 504 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 WDR34Q96EX3 536 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 FOXN4Q96NZ1 517 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 POFUT1Q9H488 388 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 C6orf106Q9H6K1 298 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 AKAP7Q9P0M2 348 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ACAD8Q9UKU7 415 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 RIIAD1A6NNX1 92 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 GMFGO60234 142 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 FGF18O76093 207 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 HTR3BO95264 441 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 HTR2AP28223 471 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 CST5P28325 142 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 EFNB1P98172 346 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 DYRK1AQ13627 763 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ELAVL1Q15717 326 aaKnown RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 SLC29A4Q7RTT9 530 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 LRRC56Q8IYG6 542 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ELF4Q99607 663 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 PAPOLGQ9BWT3 736 aaKnown RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 RHBGQ9H310 441 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 XKR8Q9H6D3 395 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ZFP57Q9NU63 452 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 NPTNQ9Y639 398 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 A0A0A6YYC8 382 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 CENPVL1A0A0U1RR11 272 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 TMEM272A0A1B0GTI8 110 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 MED19A0JLT2 244 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 OR2M5A3KFT3 312 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 OR5H14A6NHG9 310 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 TUBAL3A6NHL2 446 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 I3L1I5 382 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 GP1BAP07359 652 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 SRMP19623 302 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 TEAD2Q15562 447 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 GDF7Q7Z4P5 450 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-201ENST00000349038 WBP1LQ9NX94 342 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 AHSPQ9NZD4 102 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 IKZF2Q9UKS7 526 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ICKQ9UPZ9 632 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 ZNF337Q9Y3M9 751 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3DA0A087WVF3 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3IA0A087WXS9 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3EA0A087X179 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 hCG_1809904A0A1W2PP81 198 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 A0A1W2PR64 198 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 A0A1W2PRV1 198 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3BA6NDS4 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3LB9A6J9 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 EIF1BO60739 113 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 SBK2P0C263 348 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3HP0C7X1 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 AVPR2P30518 371 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 EIF1P41567 113 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 ATP1B3P54709 279 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3CQ6IPX1 549 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 NXPE4Q6UWF7 544 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 TBC1D3Q8IZP1 549 aaPredicted RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 OR51D1Q8NGF3 324 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 CLCC1Q96S66 551 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 EFCAB11Q9BUY7 163 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 MRPS18AQ9NVS2 196 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 GABARAPH6UMI1 98 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 YKT6O15498 198 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 DCNP07585 359 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 ITGA3P26006 1051 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 ID4P47928 161 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 ALKBH1Q13686 389 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 EIF2B1Q14232 305 aaKnown RBP13.94□□□□□ -0.18
PTBP1-201ENST00000349038 UBE2NLQ5JXB2 153 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 PRAMEF14Q5SWL7 426 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 C22orf39Q6P5X5 142 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 CD300LDQ6UXZ3 194 aa13.94□□□□□ -0.18
PTBP1-201ENST00000349038 FAM122BQ7Z309 247 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms