RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 TMED7Q9Y3B3 224 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 DHRS4L1P0CG22 281 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 LIPCP11150 499 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 TBC1D28Q2M2D7 210 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 ADGRG5Q8IZF4 528 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 BPIFB2Q8N4F0 458 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 SLC46A1Q96NT5 459 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 TRIM61Q5EBN2 209 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 C1orf123Q9NWV4 160 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 NUP188Q5SRE5 1749 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 NKAIN2Q5VXU1 208 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 H1FXQ92522 213 aaKnown RBP21.47■■□□□ 1.03
NPAS3-201ENST00000346562 RBMXL1Q96E39 390 aaKnown RBP21.47■■□□□ 1.03
NPAS3-201ENST00000346562 PGAP2Q9UHJ9 254 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF225Q9UK10 706 aa21.47■■□□□ 1.03
NPAS3-201ENST00000346562 SLC22A23A1A5C7 686 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 AKR1C1Q04828 323 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 CD300LGQ6UXG3 332 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 B3GNT8Q7Z7M8 397 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 FRMD1Q8N878 549 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 H7C1Q1 480 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 RAB11AP62491 216 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 OR2A12Q8NGT7 310 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 ARRDC2Q8TBH0 407 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 CACNA1FO60840 1977 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 MFAP5Q13361 173 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 HS3ST2Q9Y278 367 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 HOXB5P09067 269 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 VEGFCP49767 419 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 C1GALT1Q9NS00 363 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 TLCD2A6NGC4 264 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 RGS11O94810 467 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 GAB1Q13480 694 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 C14orf28Q4W4Y0 310 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 RNLSQ5VYX0 342 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 PAQR8Q8TEZ7 354 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.03
NPAS3-201ENST00000346562 ZNF576Q9H609 170 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 PRDM9Q9NQV7 894 aa21.46■■□□□ 1.03
NPAS3-201ENST00000346562 FAM183AA6NL82 134 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 ZNF701M0R085 212 aaPredicted RBP21.45■■□□□ 1.02
NPAS3-201ENST00000346562 GABRPO00591 440 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 SSTR4P31391 388 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 SRPXP78539 464 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 CAMK2BQ13554 666 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 NAA40Q86UY6 237 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 OR8J2Q8NGG1 315 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 HSD17B8Q92506 261 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 TMEM59Q9BXS4 323 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 SLC38A1Q9H2H9 487 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 HTRA3P83110 453 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 PRICKLE2Q7Z3G6 844 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 CST9LP1Q5W188 147 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 MBOAT2Q6ZWT7 520 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 LRRC56Q8IYG6 542 aaPredicted RBP21.45■■□□□ 1.02
NPAS3-201ENST00000346562 HS3ST3A1Q9Y663 406 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 ABHD16AO95870 558 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 IL1AP01583 271 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 BCKDHBP21953 392 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 PRPH2P23942 346 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 HBA1P69905 142 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 MARCH8Q5T0T0 291 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 UBTD2Q8WUN7 234 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 SAMD10Q9BYL1 202 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 WDR76Q9H967 626 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 CD300AQ9UGN4 299 aa21.45■■□□□ 1.02
NPAS3-201ENST00000346562 TMEM221A6NGB7 291 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 ATXN1LP0C7T5 689 aaKnown RBP21.44■■□□□ 1.02
NPAS3-201ENST00000346562 ADRA1AP35348 466 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 ATOH8Q96SQ7 321 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 KATNB1Q9BVA0 655 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 H0YIV9 168 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 EDN3P14138 238 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 OPRL1P41146 370 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 BIDP55957 195 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 PGAP1Q75T13 922 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 CLEC14AQ86T13 490 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 SPARTQ8N0X7 666 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 OR4F15Q8NGB8 312 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 MRPS28Q9Y2Q9 187 aaKnown RBP21.44■■□□□ 1.02
NPAS3-201ENST00000346562 ARFGEF2Q9Y6D5 1785 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 DLX5P56178 289 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 IL10RAQ13651 578 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 NOXA1Q86UR1 476 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 RAB3CQ96E17 227 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 PPA2Q9H2U2 334 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 J3KTA2 159 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 NXPH2O95156 264 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 ZIC2O95409 532 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-201ENST00000346562 LSAMPQ13449 338 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 SLC9A3R2Q15599 337 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 OBP2AQ9NY56 170 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 TNFRSF10AO00220 468 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 HTR2CP28335 458 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 CPNE4Q96A23 557 aaPredicted RBP21.44■■□□□ 1.02
NPAS3-201ENST00000346562 PRELID3BQ9Y3B1 194 aa21.44■■□□□ 1.02
NPAS3-201ENST00000346562 GPR171O14626 319 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 RGRP47804 291 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 SLC5A12Q1EHB4 618 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 PAPD4Q6PIY7 484 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms