RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR5H1A6NKK0 313 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 CPSF4LA6NMK7 179 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 FXYD1O00168 92 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 CHP2O43745 196 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 RAD51DO75771 328 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 THBDP07204 575 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 CD3EP07766 207 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 COX5AP20674 150 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 IGHV1-2P23083 117 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 LSP1P33241 339 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 SEC24CP53992 1094 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 GNGT1P63211 74 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 TAB1Q15750 504 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 LRRC23Q53EV4 343 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 ENTPD8Q5MY95 495 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 C1QTNF12Q5T7M4 302 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 TTC33Q6PID6 262 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 KLHL17Q6TDP4 642 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 KLHL24Q6TFL4 600 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 H1FNTQ75WM6 255 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 CALHM3Q86XJ0 350 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF433Q8N7K0 673 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 OR6T1Q8NGN1 323 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 MBD6Q96DN6 1003 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 MPP4Q96JB8 637 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 OXGR1Q96P68 337 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 ALPK1Q96QP1 1244 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 TMEM43Q9BTV4 400 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 SLCO5A1Q9H2Y9 848 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 LIME1Q9H400 295 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 SH3GLB1Q9Y371 365 aa13.93□□□□□ -0.18
TSPAN4-201ENST00000346501 DYNC1I1O14576 645 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 KLF4O43474 513 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 GMNNO75496 209 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 OR6A2O95222 327 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 NUDT2P50583 147 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 GZMMP51124 257 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 CDH12P55289 794 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 EGR4Q05215 589 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 ACKR1Q16570 336 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 DEFB113Q30KQ7 82 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 NIPAL3Q6P499 406 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 SPNS3Q6ZMD2 512 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF704Q6ZNC4 412 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 CREB3L2Q70SY1 520 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 MICU2Q8IYU8 434 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 GPR32P1Q8NGA4 272 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 ADAMTS16Q8TE57 1224 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 TAAR8Q969N4 342 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 TAMM41Q96BW9 452 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF583Q96ND8 569 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 PRR14Q9BWN1 585 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 POLR2J2Q9GZM3 115 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 POLR2J3Q9H1A7 115 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 BEX4Q9NWD9 120 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 RNF115Q9Y4L5 304 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 MAGED1Q9Y5V3 778 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 AKAP6Q13023 2319 aa13.92□□□□□ -0.18
TSPAN4-201ENST00000346501 FREM1Q5H8C1 2179 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 FTCDNL1E5RQL4 147 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF587BE7ETH6 402 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 M0R082 166 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 CLOCKO15516 846 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 SNX3O60493 162 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 SLC43A1O75387 559 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 HIST1H2ABP04908 130 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 PAX7P23759 505 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 MPGP29372 298 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 PRDX6P30041 224 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 GRPRP30550 384 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 KDELR2P33947 212 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 TAS2R41P59536 307 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 PMS2P3Q13401 168 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 HACD2Q6Y1H2 254 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 HIST3H2AQ7L7L0 130 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 COMTD1Q86VU5 262 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 CARM1Q86X55 608 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 UEVLDQ8IX04 471 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 DEPDC4Q8N2C3 294 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 C17orf78Q8N4C9 275 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 SCAIQ8N9R8 606 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 ADPRHL1Q8NDY3 354 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF417Q8TAU3 575 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 HIST1H2ACQ93077 130 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF385AQ96PM9 386 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 ZNF587Q96SQ5 575 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 CCL19Q99731 98 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 PTDSS2Q9BVG9 487 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 SLC7A10Q9NS82 523 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 SLC7A7Q9UM01 511 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 RCE1Q9Y256 329 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 FBN2P35556 2912 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 LRBAP50851 2863 aa13.91□□□□□ -0.18
TSPAN4-201ENST00000346501 DCHS2Q6V1P9 2916 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 SIAH2O43255 324 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 ARHGEF9O43307 516 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 SMPD2O60906 423 aa13.9□□□□□ -0.18
TSPAN4-201ENST00000346501 ATE1O95260 518 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms