RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 COL9A2Q14055 689 aaPredicted RBP16.24■□□□□ 0.19
SPAST-202ENST00000345662 HSF5Q4G112 596 aaPredicted RBP16.24■□□□□ 0.19
SPAST-202ENST00000345662 XAF1Q6GPH4 301 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 TNFRSF13CQ96RJ3 184 aa16.24■□□□□ 0.19
SPAST-202ENST00000345662 IMPA2O14732 288 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 BRINP1O60477 761 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 ITGB2P05107 769 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 ZNF43P17038 809 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 FBLP22087 321 aaKnown RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 KIAA0141Q14154 515 aaPredicted RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 EOGTQ5NDL2 527 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 PAQR6Q6TCH4 344 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 ABHD12BQ7Z5M8 362 aaPredicted RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 DVL3Q92997 716 aaPredicted RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 SENP5Q96HI0 755 aaPredicted RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 ISYNA1Q9NPH2 558 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 STEAP1Q9UHE8 339 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 MYH9P35579 1960 aaKnown RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 GPR137BO60478 399 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 DGCR2P98153 550 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 MALLQ13021 153 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 PRICKLE2Q7Z3G6 844 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 KLHDC7BQ96G42 594 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 KLF16Q9BXK1 252 aaPredicted RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 SLC2A4RGQ9NR83 387 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 CPED1A4D0V7 1026 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 OR2F2O95006 317 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 DLX2Q07687 328 aaPredicted RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 OR2F1Q13607 317 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 OR51Q1Q8NH59 317 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 UBQLN3Q9H347 655 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 ZNF160Q9HCG1 818 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 PURGQ9UJV8 347 aaKnown RBP16.23■□□□□ 0.19
SPAST-202ENST00000345662 TOPAZ1Q8N9V7 1692 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 CHD4Q14839 1912 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 CD300LBA8K4G0 201 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 HBE1P02100 147 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 SERTAD2Q14140 314 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 FAHD1Q6P587 224 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 LIPIQ6XZB0 460 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 SPTSSAQ969W0 71 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 DTD2Q96FN9 168 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 KLHL13Q9P2N7 655 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 SCML1Q9UN30 329 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 TRAPPC4Q9Y296 219 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 FBXO7Q9Y3I1 522 aa16.23■□□□□ 0.19
SPAST-202ENST00000345662 LILRB5O75023 590 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 LDB3O75112 727 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 SERPINA7P05543 415 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 KLK3P07288 261 aaPredicted RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 SBK3P0C264 359 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 CPT2P23786 658 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 GABRR1P24046 479 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 KIR2DL3P43628 341 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 MFGE8Q08431 387 aaPredicted RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 SNTB1Q13884 538 aaKnown RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 OVCH1Q7RTY7 1134 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 CHTF18Q8WVB6 975 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 HIDE1A8MVS5 230 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 ZBTB42B2RXF5 422 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 M0QYG6 137 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 SEC14L5O43304 696 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 IL33O95760 270 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 PRAMEF8Q5VWM4 474 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 PRAMEF7Q5VXH5 474 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 WBP2NLQ6ICG8 309 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 OR52R1Q8NGF1 315 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 FOXJ1Q92949 421 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 SGCZQ96LD1 299 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 RHNO1Q9BSD3 238 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 C1QTNF3Q9BXJ4 246 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 ZNF768Q9H5H4 540 aaKnown RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 A0A087WZY1 265 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 AIFM1O95831 613 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 EXOSC7Q15024 291 aaKnown RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 OR51S1Q8NGJ8 323 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 KCNIP1Q9NZI2 227 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 MUTYHQ9UIF7 546 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 CPMP14384 443 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 RIN1Q13671 783 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 CLPPQ16740 277 aaPredicted RBP16.22■□□□□ 0.19
SPAST-202ENST00000345662 FRMD1Q8N878 549 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 OR6M1Q8NGM8 313 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 OR52I2Q8NH67 350 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 NIPSNAP3BQ9BS92 247 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 DEFB126Q9BYW3 111 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 IFT22Q9H7X7 185 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 FBXL4Q9UKA2 621 aa16.22■□□□□ 0.19
SPAST-202ENST00000345662 B4GALT3O60512 393 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 MAKP20794 623 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 PLGLB1Q02325 96 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 AKR1C1Q04828 323 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 GDF7Q7Z4P5 450 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 MDGA2Q7Z553 956 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 TMEM255BQ8WV15 326 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 TBC1D20Q96BZ9 403 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 IKZF5Q9H5V7 419 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 MRPS17Q9Y2R5 130 aaKnown RBP16.21■□□□□ 0.19
SPAST-202ENST00000345662 MT-CO2P00403 227 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms