RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 GABRPO00591 440 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 NTN3O00634 580 aaPredicted RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 CPNE3O75131 537 aaKnown RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 FGF5P12034 268 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 CAV3P56539 151 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 PRPS1P60891 318 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 ERVK-25P63136 954 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 IL11RAQ14626 422 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 CARTPTQ16568 116 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 ASCL5Q7RTU5 278 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 SUMF1Q8NBK3 374 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 AGBL5Q8NDL9 886 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 TP53INP1Q96A56 240 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 KTI12Q96EK9 354 aaPredicted RBP16.93■□□□□ 0.3
HOXA9-201ENST00000343483 DIRAS2Q96HU8 199 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 LPAR4Q99677 370 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 ADAM19Q9H013 955 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 MMP25Q9NPA2 562 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 KLHL21Q9UJP4 597 aa16.93■□□□□ 0.3
HOXA9-201ENST00000343483 SSX4O60224 188 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 FADS1O60427 444 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 CXCR1P25024 350 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 AQP2P41181 271 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 BAK1Q16611 211 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 CLPPQ16740 277 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-201ENST00000343483 FAM69BQ5VUD6 431 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 CPEB2Q7Z5Q1 589 aaKnown RBP16.92■□□□□ 0.3
HOXA9-201ENST00000343483 OR5W2Q8NH69 310 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 SETD6Q8TBK2 473 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 SMAP2Q8WU79 429 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-201ENST00000343483 TXNDC15Q96J42 360 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 ADGRL4Q9HBW9 690 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 TIGARQ9NQ88 270 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 ASB6Q9NWX5 421 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 HTR3EA5X5Y0 456 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 FABP12A6NFH5 140 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 CD8B2A6NJW9 211 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 ONECUT2O95948 504 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 SBK2P0C263 348 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 CD8BP10966 210 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 ZNF28P17035 718 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 PGCP20142 388 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 FBXW4P57775 412 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 CBFBQ13951 182 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 GLYR1Q49A26 553 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-201ENST00000343483 VASNQ6EMK4 673 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 BPHLQ86WA6 291 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-201ENST00000343483 OR51L1Q8NGJ5 315 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 RASD2Q96D21 266 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 DNAJA3Q96EY1 480 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 NMNAT3Q96T66 252 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 WDR77Q9BQA1 342 aaPredicted RBP16.92■□□□□ 0.3
HOXA9-201ENST00000343483 NRIP3Q9NQ35 241 aa16.92■□□□□ 0.3
HOXA9-201ENST00000343483 PTPRZ1P23471 2315 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-201ENST00000343483 ZNF354AO60765 605 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-201ENST00000343483 IGF2P01344 180 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 GP1BBP13224 206 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 IL7P13232 177 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 CCL4P13236 92 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 RPS5P46782 204 aaKnown RBP16.91■□□□□ 0.3
HOXA9-201ENST00000343483 TPTEP56180 551 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 BDH1Q02338 343 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 INSL4Q14641 139 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 FAM199XQ6PEV8 388 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-201ENST00000343483 SPATC1Q76KD6 591 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 CELF2-AS1Q8N7Q2 184 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 NEIL3Q8TAT5 605 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 DUSP19Q8WTR2 217 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 SMPDL3BQ92485 455 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 ZMYND19Q96E35 227 aaPredicted RBP16.91■□□□□ 0.3
HOXA9-201ENST00000343483 LRFN5Q96NI6 719 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 C12orf10Q9HB07 376 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 BABAM2Q9NXR7 383 aa16.91■□□□□ 0.3
HOXA9-201ENST00000343483 ZNF292O60281 2723 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 P2RX1P51575 399 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 GALEQ14376 348 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 XKRXQ6PP77 449 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 AKAP14Q86UN6 197 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 BMPERQ8N8U9 685 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 NUBPLQ8TB37 319 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 TAAR8Q969N4 342 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 SLC26A1Q9H2B4 701 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 RXFP3Q9NSD7 469 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 PPIEQ9UNP9 301 aaKnown RBP16.9■□□□□ 0.3
HOXA9-201ENST00000343483 HIF3AQ9Y2N7 669 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 DCHS1Q96JQ0 3298 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 TEX13CA0A0J9YWL9 993 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 ARPC3O15145 178 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 RNF13O43567 381 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 CDC40O60508 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
HOXA9-201ENST00000343483 WISP1O95388 367 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 ASAH2BP0C7U1 165 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 GAAP10253 952 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 MPLP40238 635 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 LTBQ06643 244 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 ZFP36L1Q07352 338 aaKnown RBP16.9■□□□□ 0.3
HOXA9-201ENST00000343483 TRA2AQ13595 282 aaKnown RBP eCLIP16.9■□□□□ 0.3
HOXA9-201ENST00000343483 EFR3AQ14156 821 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 QPRTQ15274 297 aa16.9■□□□□ 0.3
HOXA9-201ENST00000343483 ALG10Q5BKT4 473 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms