RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 OR2AJ1Q8NGZ0 328 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 NRIP3Q9NQ35 241 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 CBLCQ9ULV8 474 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 RBBP6Q7Z6E9 1792 aaKnown RBP11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 RAF1P04049 648 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 H2BFMP0C1H6 154 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF77Q15935 545 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 CMTM4Q8IZR5 234 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 RELL2Q8NC24 303 aaPredicted RBP11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 OR13C3Q8NGS6 347 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 FCRL1Q96LA6 429 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 TPSD1Q9BZJ3 242 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC25A19Q9HC21 320 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 FGF20Q9NP95 211 aaPredicted RBP11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 TCRBV21S2A2A0A5A6 115 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 CDK5Q00535 292 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 GPR18Q14330 331 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 DMRTC1Q5HYR2 192 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 RPL22L1Q6P5R6 122 aaKnown RBP11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 Q6ZSR6 202 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 TOR1AIP2Q8NFQ8 470 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 ELOVL3Q9HB03 270 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
SNRNP48-201ENST00000342415 CCSO14618 274 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 M6PRP20645 277 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 EIF2B1Q14232 305 aaKnown RBP11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 OR4D9Q8NGE8 314 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 MAFFQ9ULX9 164 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 ICKQ9UPZ9 632 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 TMEM14AQ9Y6G1 99 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 BRWD3Q6RI45 1802 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 M0R036 132 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 OR2T7P0C7T2 308 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 NID1P14543 1247 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF250P15622 560 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 UGT2B7P16662 529 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC2A5P22732 501 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 RIDAP52758 137 aaKnown RBP11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 MFSD9Q8NBP5 474 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 OR2T27Q8NH04 317 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 RBPMSQ93062 196 aaKnown RBP11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 SLC25A44Q96H78 314 aaPredicted RBP11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 B3GNT2Q9NY97 397 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 KLRF1Q9NZS2 232 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 SERGEFQ9UGK8 458 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 CAMK2AQ9UQM7 478 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 NEUROG3Q9Y4Z2 214 aa11.46□□□□□ -0.57
SNRNP48-201ENST00000342415 FITM1A5D6W6 292 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 C17orf105B2RV13 164 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 AK1P00568 194 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 ATF1P18846 271 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 ENDOUP21128 410 aaKnown RBP11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 OR1D4P47884 311 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 PLCXD2Q0VAA5 305 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 NSDHLQ15738 373 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 MAPK14Q16539 360 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 VASNQ6EMK4 673 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 LCN10Q6JVE6 187 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 BAIAP2L2Q6UXY1 529 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 TSEN54Q7Z6J9 526 aaKnown RBP11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 LIX1LQ8IVB5 337 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 NARFLQ9H6Q4 476 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF701Q9NV72 531 aaPredicted RBP11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 NCDNQ9UBB6 729 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 RBM7Q9Y580 266 aaKnown RBP11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 B8ZZF3 427 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 EGFP01133 1207 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 GK2Q14410 553 aaPredicted RBP11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 NKAPLQ5M9Q1 402 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 FAM69AQ5T7M9 428 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 SLC29A4Q7RTT9 530 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 OR51S1Q8NGJ8 323 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 MNTQ99583 582 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 CCDC86Q9H6F5 360 aaKnown RBP11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 CMC2Q9NRP2 79 aa11.46□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF736B4DX44 427 aaPredicted RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ATP6V1G2-DDX39BF2Z307 99 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 SRSF5Q13243 272 aaKnown RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CD276Q5ZPR3 534 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 C17orf107Q6ZR85 190 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF765Q7L2R6 523 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 IQCF2Q8IXL9 164 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 OR1E3Q8WZA6 343 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 KLHL15Q96M94 604 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 DAPP1Q9UN19 280 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 MN1Q10571 1320 aaPredicted RBP11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CPED1A4D0V7 1026 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ARRDC5A6NEK1 342 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 GPR171O14626 319 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 CHP2O43745 196 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 KNG1P01042 644 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 ZNF28P17035 718 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 MAOAP21397 527 aa11.45□□□□□ -0.58
SNRNP48-201ENST00000342415 BLKP51451 505 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms