RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ANAPC1Q9H1A4 1944 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 A0A1W2PQU0 124 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 C19orf67A6NJJ6 358 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SNRPGP15A8MWD9 76 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MPPED1O15442 326 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CIDEAO60543 219 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CBX6O95503 412 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PPP1R17O96001 155 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LCATP04180 440 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 UGT1A4P22310 534 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PRKCHP24723 683 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NADK2Q4G0N4 442 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 VRK2Q86Y07 508 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM151AQ8N4L1 468 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 HAS2Q92819 552 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LGALS12Q96DT0 336 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 AKR1E2Q96JD6 320 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SUV39H2Q9H5I1 410 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OLAHQ9NV23 265 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZDHHC3Q9NYG2 299 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GRHPRQ9UBQ7 328 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FBXL2Q9UKC9 423 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 DNAJC15Q9Y5T4 150 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TRAV17A0A0B4J275 112 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM212A6NML5 194 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BLOC1S5-TXNDC5H3BN57 136 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TRIM77I1YAP6 450 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 KCNAB3O43448 404 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PMP2P02689 132 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TYMSP04818 313 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MPC1LP0DKB6 136 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MYF6P23409 242 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MTNR1AP48039 350 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CD97P48960 835 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CSNK1EP49674 416 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 IRF9Q00978 393 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CHIT1Q13231 466 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GPR17Q13304 367 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TRA2AQ13595 282 aaKnown RBP eCLIP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 NRF1Q16656 503 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM30BQ3MIR4 351 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PDLIM3Q53GG5 364 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 RHBDF2Q6PJF5 856 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LDB1Q86U70 411 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR6F1Q8NGZ6 308 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 STK35Q8TDR2 534 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TFGQ92734 400 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR1F2PQ96R84 312 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 DIRC2Q96SL1 478 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LRFN3Q9BTN0 628 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 STRA6Q9BX79 667 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FOXQ1Q9C009 403 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BANF2Q9H503 90 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM181Q9P2C4 612 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ENPP5Q9UJA9 477 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 HHLA2Q9UM44 414 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 AK6Q9Y3D8 172 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PTPRQQ9UMZ3 2332 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 INSIG1O15503 277 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR1F1O43749 312 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EEDO75530 441 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PMS2P2O95744 297 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 APLNRP35414 380 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BSGP35613 385 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GABRA2P47869 451 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 YBX1P67809 324 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CSNK2A1P68400 391 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CTBSQ01459 385 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SLC18A2Q05940 514 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TGFBIQ15582 683 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 HAGHQ16775 308 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF628Q5EBL2 1059 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CTSL3PQ5NE16 218 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PPP1R26Q5T8A7 1209 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BTNL3Q6UXE8 466 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MAML2Q8IZL2 1156 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BANPQ8N9N5 519 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 OR1M1Q8NGA1 313 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF675Q8TD23 568 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FCRL1Q96LA6 429 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 CDCP1Q9H5V8 836 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TREM1Q9NP99 234 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TUBG2Q9NRH3 451 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 ZCCHC3Q9NUD5 404 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TVP23BQ9NYZ1 205 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 FBLL1A6NHQ2 334 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM189-UBE2V1I3L0A0 370 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 GABRPO00591 440 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 LGI1O95970 557 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 TUBG1P23258 451 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SNRPEP62304 92 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SNRPD2P62316 118 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 RPL24P83731 157 aaKnown RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 HTD2P86397 168 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 MLLT11Q13015 90 aaPredicted RBP3.07□□□□□ -1.92
CSMD3-202ENST00000339701 BATFQ16520 125 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 EML3Q32P44 896 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 PAPPA-AS1Q5QFB9 102 aa3.07□□□□□ -1.92
CSMD3-202ENST00000339701 SSX9Q7RTT3 188 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms