RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 BIKQ13323 160 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 GPR176Q14439 515 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 FGFBP1Q14512 234 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 KIR2DS5Q14953 304 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 CDK5R1Q15078 307 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 ALG11Q2TAA5 492 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 SLC22A10Q63ZE4 541 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 RPL22L1Q6P5R6 122 aaKnown RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 FGD2Q7Z6J4 655 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 NR2C2APQ86WQ0 139 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 SPACA3Q8IXA5 215 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 CA13Q8N1Q1 262 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 C7orf57Q8NEG2 295 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 OR4M1Q8NGD0 313 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 ABHD4Q8TB40 342 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 C15orf40Q8WUR7 153 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 JPH3Q8WXH2 748 aaPredicted RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 PTP4A1Q93096 173 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 RADILQ96JH8 1075 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 FYTTD1Q96QD9 318 aaKnown RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 MACROD1Q9BQ69 325 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 THAP7Q9BT49 309 aaPredicted RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 IFT27Q9BW83 186 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 DPAGT1Q9H3H5 408 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 RANBP3Q9H6Z4 567 aaPredicted RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 MARCH7Q9H992 704 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 ISG20L2Q9H9L3 353 aaKnown RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 ASCL3Q9NQ33 180 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 NLKQ9UBE8 527 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 KCNE5Q9UJ90 142 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 SPATA2Q9UM82 520 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 CAMK2AQ9UQM7 478 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 NTNG1Q9Y2I2 539 aa9.88□□□□□ -0.83
RTN3-201ENST00000338850 SIRT4Q9Y6E7 314 aaPredicted RBP9.88□□□□□ -0.83
RTN3-201ENST00000338850 LOC400499M0QZD8 3231 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 GCN1Q92616 2671 aaKnown RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 C2orf92A0A1B0GVN3 265 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 NAP1L6A6NFF2 107 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 OR6C70A6NIJ9 312 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 IMPA2O14732 288 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 SULT1B1O43704 296 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 FGF17O60258 216 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 PRAF2O60831 178 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ZNF780AO75290 641 aaPredicted RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 RAB3BP20337 219 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 CFPP27918 469 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 BTCP35070 178 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ACAA2P42765 397 aaKnown RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 CAV3P56539 151 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 FHL1Q13642 323 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 CRMP1Q14194 572 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 TCEA2Q15560 299 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ZNHIT3Q15649 155 aaPredicted RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 GPR68Q15743 365 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 DEFB134Q4QY38 66 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 IDNKQ5T6J7 187 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 FAM69AQ5T7M9 428 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ULK3Q6PHR2 472 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 IGF2-ASQ6U949 168 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 THSD4Q6ZMP0 1018 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 DPY19L2P2Q6ZN68 376 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 MED25Q71SY5 747 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 NANOGNBQ7Z5D8 188 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 HMGN2P46Q86SG4 172 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ARHGEF39Q8N4T4 335 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 AVL9Q8NBF6 648 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ZNF248Q8NDW4 579 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 OR10H4Q8NGA5 316 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 OR14A16Q8NHC5 309 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 PFN4Q8NHR9 129 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 UBASH3BQ8TF42 649 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 SMPDL3BQ92485 455 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 THRSPQ92748 146 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 NAT6Q93015 286 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 TSACCQ96A04 125 aaPredicted RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 CNN2Q99439 309 aaKnown RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 MNTQ99583 582 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 PELOQ9BRX2 385 aaKnown RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 GHITMQ9H3K2 345 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 MCCC2Q9HCC0 563 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 ADAP2Q9NPF8 381 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 MEPEQ9NQ76 525 aaPredicted RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 C20orf141Q9NUB4 165 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 DNAJB12Q9NXW2 375 aaKnown RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 B3GNT2Q9NY97 397 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 STMN3Q9NZ72 180 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 SLC6A5Q9Y345 797 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
RTN3-201ENST00000338850 SCN3AQ9NY46 2000 aa9.87□□□□□ -0.83
RTN3-201ENST00000338850 CFAP46Q8IYW2 2715 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 A0A0G2JMP0 313 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 CENPVL1A0A0U1RR11 272 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 A0A0X1KG70 313 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 A0A1B0GWA3 101 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 SLC9B1P1A6NJY1 282 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 ZNF879B4DU55 563 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 LRRN3E7EW58 273 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 H0YGG7 62 aa9.86□□□□□ -0.83
RTN3-201ENST00000338850 PDCD5O14737 125 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms