RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PLCE1Q9P212 2302 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 ABCA1O95477 2261 aa11.69□□□□□ -0.54
NUDCD3-201ENST00000338427 A0A096LPE4 126 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 A0A1W2PPZ6 126 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 TMEM229AB2RXF0 380 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 ATP6V1G2-DDX39BF2Z307 99 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 TPST2O60704 377 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 BMP2P12643 396 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 HTR2AP28223 471 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 PPP2R2BQ00005 443 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 MST1LQ2TV78 715 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 AGKQ53H12 422 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 WDFY1Q8IWB7 410 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 MUC15Q8N387 334 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 LRRC8CQ8TDW0 803 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 BCL2L2Q92843 193 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 SPDL1Q96EA4 605 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 ZNF837Q96EG3 531 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 C7orf26Q96N11 449 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 SF3B5Q9BWJ5 86 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 SEC61A2Q9H9S3 476 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 MGAT4BQ9UQ53 548 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 IFT52Q9Y366 437 aa11.68□□□□□ -0.54
NUDCD3-201ENST00000338427 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 IGKV1D-42A0A075B6H8 117 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 A0A1B0GWA3 101 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 TMEM247A6NEH6 219 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 C5orf58C9J3I9 102 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 POLR3GO15318 223 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 KRT33AO76009 404 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 ARAFP10398 606 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 PNMTP11086 282 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 AQP1P29972 269 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 MAP2K6P52564 334 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 CLDN17P56750 224 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 PRPS1P60891 318 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 TBRG1Q3YBR2 411 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 LRIF1Q5T3J3 769 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 PRAMEF8Q5VWM4 474 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 PRAMEF7Q5VXH5 474 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 FBXL14Q8N1E6 418 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 BBS10Q8TAM1 723 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 STK35Q8TDR2 534 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 GRIP2Q9C0E4 1043 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 YAE1D1Q9NRH1 226 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 TMEM45AQ9NWC5 275 aa11.67□□□□□ -0.54
NUDCD3-201ENST00000338427 FBN1P35555 2871 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 TRBV5-3A0A0A0MS03 114 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 IGHV1-18A0A0C4DH31 117 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ELOA3DA6NLF2 546 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 LRRN3E7EW58 273 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 MS4A18H0YCH9 400 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 CRLF1O75462 422 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 AHSA1O95433 338 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 TGDSO95455 350 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 HLA-DOBP13765 273 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 GRPRP30550 384 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 STX1BP61266 288 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ARF1P84077 181 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 CDK6Q00534 326 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 SELPLGQ14242 412 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 RAB35Q15286 201 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ADRM1Q16186 407 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 MS4A18Q3C1V0 323 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ELOA3BQ3SY89 546 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 GCNT6Q5T4J0 391 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 DLEU7Q6UYE1 221 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 DEPDC4Q8N2C3 294 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ZNF525Q8N782 197 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 GOLGA6L1Q8N7Z2 621 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 POMGNT2Q8NAT1 580 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ELOA3Q8NG57 546 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 OR10H5Q8NGA6 315 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 RNF217Q8TC41 542 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 FBXO17Q96EF6 278 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ATP6V1G3Q96LB4 118 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 ALKBH3Q96Q83 286 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 RHNO1Q9BSD3 238 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 CCDC28BQ9BUN5 200 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 NELFAQ9H3P2 528 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 FAIMQ9NVQ4 179 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 B3GAT1Q9P2W7 334 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 AMDHD2Q9Y303 409 aa11.66□□□□□ -0.54
NUDCD3-201ENST00000338427 A0A096LNT2 108 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 M0R082 166 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 ZNF432O94892 652 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 HPRP00739 348 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 CELA3BP08861 270 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 APOBEC3AP31941 199 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 MRPL19P49406 292 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 NUDT6P53370 316 aa11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 ROR2Q01974 943 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-201ENST00000338427 TGFBR3Q03167 851 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms