RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FAM214BQ7L5A3 538 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 CCDC103Q8IW40 242 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 LINC00471Q8N535 108 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 CNEP1R1Q8N9A8 125 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 SCAIQ8N9R8 606 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 PAPD5Q8NDF8 572 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 OR2T29Q8NH02 315 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 OR52J3Q8NH60 311 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 LILRB4Q8NHJ6 448 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 SSC4DQ8WTU2 575 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 UTP4Q969X6 686 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 DHRS1Q96LJ7 313 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 SFXN3Q9BWM7 321 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 PIGMQ9H3S5 423 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 FKRPQ9H9S5 495 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 CHST11Q9NPF2 352 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 MEPEQ9NQ76 525 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 MAN2C1Q9NTJ4 1040 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 MRPL39Q9NYK5 338 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 EMC3Q9P0I2 261 aa10.63□□□□□ -0.71
SPTLC1-202ENST00000337841 A0A1W2PNV4 684 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 AQP7P3A6NL99 342 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ENO4A6NNW6 628 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF724A8MTY0 619 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 M0R082 166 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 SS18L1O75177 396 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 FKBP6O75344 327 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 OR7A10O76100 309 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 CST1P01037 141 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 PTNP21246 168 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ERFP50548 548 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 HMGA2P52926 109 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 IL1RL1Q01638 556 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 PRKCDQ05655 676 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 FOXF2Q12947 444 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 C1DQ13901 141 aaKnown RBP10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 GK3PQ14409 553 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF74Q16587 644 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 SLC25A35Q3KQZ1 300 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 TBPL2Q6SJ96 375 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 GALNT5Q7Z7M9 940 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 TUSC5Q8IXB3 177 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 NRMQ8IXM6 262 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 GCNT2Q8N0V5 402 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 OR5J2Q8NH18 312 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 PFN4Q8NHR9 129 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF417Q8TAU3 575 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 SLC7A13Q8TCU3 470 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ABHD3Q8WU67 409 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 BPIFA2Q96DR5 249 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 LRRC46Q96FV0 321 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 OXGR1Q96P68 337 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ALPK1Q96QP1 1244 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF587Q96SQ5 575 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 REEP1Q9H902 201 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 BCO1Q9HAY6 547 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 KCNJ16Q9NPI9 418 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 PARPBPQ9NWS1 579 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 KLHL13Q9P2N7 655 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF229Q9UJW7 825 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 CLEC4AQ9UMR7 237 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 TMEM5Q9Y2B1 443 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 AP4S1Q9Y587 144 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 MED12Q93074 2177 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
SPTLC1-202ENST00000337841 IGKV3D-15A0A087WSY6 115 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 LOC102725191A0A1B0GVB3 256 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 SH3PXD2BA1X283 911 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 CLEC18AA5D8T8 446 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 EFCAB9A8MZ26 197 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 PLPP3O14495 311 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 HNRNPRO43390 633 aaKnown RBP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 FZD7O75084 574 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 CLDN14O95500 239 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF43P17038 809 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 BMP5P22003 454 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 KIR2DL2P43627 348 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 SLC16A1P53985 500 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 ACTR3P61158 418 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 SIRPAP78324 504 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 SRSF1Q07955 248 aaKnown RBP eCLIP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 CCNIQ14094 377 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 SLC17A1Q14916 467 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 TAF11Q15544 211 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 CLEC18BQ6UXF7 455 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 GPAT4Q86UL3 456 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 CLEC18CQ8NCF0 446 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 NAXEQ8NCW5 288 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 ADPRHL1Q8NDY3 354 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 OR6K3Q8NGY3 331 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 ITLN2Q8WWU7 325 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 LIPHQ8WWY8 451 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF775Q96BV0 537 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 STARD4Q96DR4 205 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 DUS3LQ96G46 650 aaKnown RBP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 MOGAT1Q96PD6 335 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 PSD2Q9BQI7 771 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 PLSCR4Q9NRQ2 329 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 DNAJB9Q9UBS3 223 aa10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 PROCRQ9UNN8 238 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms