RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CTXN1P60606 82 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 ARG2P78540 354 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 PMS2P3Q13401 168 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 NEDD8Q15843 81 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 PLBD1Q6P4A8 553 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 ARHGAP11AQ6P4F7 1023 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 CXXC5Q7LFL8 322 aaKnown RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 SATL1Q86VE3 508 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 SULF2Q8IWU5 870 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 STX19Q8N4C7 294 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 OR2M7Q8NG81 312 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 OR5B2Q96R09 309 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 TAPBPLQ9BX59 468 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 POTEKPQ9BYX7 375 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 NRIP3Q9NQ35 241 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 HINT3Q9NQE9 182 aaKnown RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 H2AFY2Q9P0M6 372 aaPredicted RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 WASF3Q9UPY6 502 aa13.25□□□□□ -0.29
CBX3-201ENST00000337620 RPL36Q9Y3U8 105 aaKnown RBP13.25□□□□□ -0.29
CBX3-201ENST00000337620 OR2M5A3KFT3 312 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 EFCAB10A6NFE3 127 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 FTCDNL1E5RQL4 147 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 M0R082 166 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 SERPINI2O75830 405 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 OR6A2O95222 327 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 MT-ND2P03891 347 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 IMPDH2P12268 514 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 HIST1H1CP16403 213 aaKnown RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 SRD5A2P31213 254 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 RFC3P40938 356 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 ST3GAL4Q11206 333 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 MYBPHQ13203 477 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 SGCBQ16585 318 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 TMEM176BQ3YBM2 270 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 GLYR1Q49A26 553 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 SLC25A25Q6KCM7 469 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 YRDCQ86U90 279 aaKnown RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 FAM98AQ8NCA5 519 aaKnown RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 BBS1Q8NFJ9 593 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 OR52E2Q8NGJ4 325 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 OR14L1PQ8NHC6 308 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 MFSD8Q8NHS3 518 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 ZNF417Q8TAU3 575 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 ZNF587Q96SQ5 575 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 MED20Q9H944 212 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 TAS2R5Q9NYW4 299 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 A0A1W2PNR3 127 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 A6NHS1 94 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 PRR23D1E9PI22 279 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 PRODHO43272 600 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 RNF13O43567 381 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 IFNGP01579 166 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 SP1P08047 785 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 CD14P08571 375 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 STSP08842 583 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 TSPAN19P0C672 248 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 PRR23D2P0DMB1 279 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 DBTP11182 482 aaKnown RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 ZNF3P17036 446 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 GDF1P27539 372 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 C21orf33P30042 268 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 MVKQ03426 396 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 ZNF91Q05481 1191 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 C19orf57Q0VDD7 668 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 FOXO1Q12778 655 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 NADK2Q4G0N4 442 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 ZNF362Q5T0B9 420 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 AADACL4Q5VUY2 407 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 GALNTL5Q7Z4T8 443 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 LRRC75AQ8NAA5 344 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 CYB561A3Q8NBI2 242 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 OR6S1Q8NH40 331 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 HAS2Q92819 552 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 GPX7Q96SL4 187 aaPredicted RBP13.24□□□□□ -0.29
CBX3-201ENST00000337620 PIGQQ9BRB3 760 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 VCX3AQ9NNX9 186 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 FKBP14Q9NWM8 211 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 MSRB2Q9Y3D2 182 aa13.24□□□□□ -0.29
CBX3-201ENST00000337620 LAMA5O15230 3695 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 LIPT2A6NK58 231 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 KDM4EB2RXH2 506 aaPredicted RBP13.23□□□□□ -0.29
CBX3-201ENST00000337620 CDK1P06493 297 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 CD46P15529 392 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 FKBP2P26885 142 aaKnown RBP13.23□□□□□ -0.29
CBX3-201ENST00000337620 SHC1P29353 583 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 CDH11P55287 796 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
CBX3-201ENST00000337620 ITGADQ13349 1161 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 CRMP1Q14194 572 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 MFSD13AQ14CX5 517 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 PRSS48Q7RTY5 328 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 MDS2Q8NDY4 140 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 FAM83FQ8NEG4 500 aaPredicted RBP13.23□□□□□ -0.29
CBX3-201ENST00000337620 SDR9C7Q8NEX9 313 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms