RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SYS1Q8N2H4 156 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 MS4A15Q8N5U1 240 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 KTI12Q96EK9 354 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 FRMD6Q96NE9 622 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 GPX7Q96SL4 187 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 CYSLTR2Q9NS75 346 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A0B4J203 849 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 PRR32B1ATL7 298 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 OGG1O15527 345 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LYRM1O43325 122 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 PTBP1P26599 531 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TACR3P29371 465 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF117Q03924 483 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 QPRTQ15274 297 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TBRG1Q3YBR2 411 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TPRA1Q86W33 373 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LRRC28Q86X40 367 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 SIX5Q8N196 739 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC25A45Q8N413 288 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LSM14AQ8ND56 463 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TRMT10AQ8TBZ6 339 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ST6GAL2Q96JF0 529 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 DMRTB1Q96MA1 342 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 OR14A2Q96R54 314 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 WACQ9BTA9 647 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 PCED1AQ9H1Q7 454 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 EXOSC3Q9NQT5 275 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 RBFOX1Q9NWB1 397 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 CLEC4AQ9UMR7 237 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 HIF3AQ9Y2N7 669 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 PCNX3Q9H6A9 2034 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TRBV2A0A0J9YWF9 115 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 H7C1C5 153 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 HCRTR2O43614 444 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LANCL1O43813 399 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 RAB3BP20337 219 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 FBLP22087 321 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 EDNRAP25101 427 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 CAPZA2P47755 286 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 INPP1P49441 399 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 NR0B1P51843 470 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 CTXN1P60606 82 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 RPS11P62280 158 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LCN6P62502 163 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 EBPQ15125 230 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ELAVL1Q15717 326 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TOMM34Q15785 309 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LINC01590Q5TEZ4 76 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 PLET1Q6UQ28 207 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TRILQ7L0X0 811 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 FAM122BQ7Z309 247 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 GPR135Q8IZ08 494 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 KCTD12Q96CX2 325 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 UBL7Q96S82 380 aaPredicted RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 LPAR4Q99677 370 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 KCNJ15Q99712 375 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 TTYH2Q9BSA4 534 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF304Q9HCX3 659 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 NLKQ9UBE8 527 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 NUFIP1Q9UHK0 495 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 VPS13AQ96RL7 3174 aa13.54□□□□□ -0.24
CLCNKA-201ENST00000331433 CACNA1CQ13936 2221 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 TCRBV16S1A1N1A0A5B0 115 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 NUDT21O43809 227 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 DUX1O43812 170 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 CPNE3O75131 537 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 WISP1O95388 367 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 CD14P08571 375 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 PRKAR1AP10644 381 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 TFPIP10646 304 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 TALDO1P37837 337 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ISXQ2M1V0 245 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF57Q68EA5 555 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 SHISA6Q6ZSJ9 500 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 MARCH3Q86UD3 253 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 JAZF1Q86VZ6 243 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 PLXDC1Q8IUK5 500 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 LRRC75AQ8NAA5 344 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ITFG2Q969R8 447 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ORAI1Q96D31 301 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 MVB12AQ96EY5 273 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 DDX28Q9NUL7 540 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 KHNYNO15037 678 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 IDH3BO43837 385 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 GLCEO94923 617 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ASAH2BP0C7U1 165 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 IL12BP29460 328 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC35D3Q5M8T2 416 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 D2HGDHQ8N465 521 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 OR5H6Q8NGV6 325 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 CAPSLQ8WWF8 208 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF486Q96H40 463 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 BEX2Q9BXY8 128 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 HDHD2Q9H0R4 259 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms