RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 AKR7LQ8NHP1 331 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SLC17A9Q9BYT1 436 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SFXN1Q9H9B4 322 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 IGKV6D-41A0A0C4DH26 115 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 PLSCR5A0PG75 271 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GJE1A6NN92 205 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 BET1O15155 118 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 PLSCR1O15162 318 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TGOLN2O43493 480 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CYCSP99999 105 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 Q6ZSR6 202 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 PIGCQ92535 297 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 FAM122AQ96E09 287 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 UHRF2Q96PU4 802 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ENKD1Q9H0I2 346 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 RNF167Q9H6Y7 350 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CICQ96RK0 1608 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 TRBV11-1A0A0K0K1C0 115 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 VEGFDO43915 354 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GABRA4P48169 554 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 OR10R2Q8NGX6 335 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 OR56B4Q8NH76 319 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GON7Q9BXV9 100 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ULBP3Q9BZM4 244 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 MEPEQ9NQ76 525 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 HSPE1-MOB4S4R3N1 261 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 TNFSF4P23510 183 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 DUSP3P51452 185 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 ELAVL3Q14576 367 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 IGSF11Q5DX21 431 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 MED30Q96HR3 178 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 ZMAT3Q9HA38 289 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 INIPQ9NRY2 104 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 FAM212BQ9NTI7 297 aaPredicted RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 CLEC2DQ9UHP7 191 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CDHR4A6H8M9 788 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 CPN1P15169 458 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SHC1P29353 583 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 RPS5P46782 204 aaKnown RBP7.38□□□□□ -1.23
CIITA-201ENST00000324288 GPR176Q14439 515 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 GAREM2Q75VX8 874 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 OR4C5Q8NGB2 326 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SLC41A2Q96JW4 573 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 DYNLRB1Q9NP97 96 aa7.38□□□□□ -1.23
CIITA-201ENST00000324288 SHPRHQ149N8 1683 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 GPR39O43194 453 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 NME2P1O60361 137 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 KHDC1LQ5JSQ8 128 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 LANCL3Q6ZV70 420 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SLC25A31Q9H0C2 315 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 NKX2-4Q9H2Z4 354 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ZDHHC7Q9NXF8 308 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 FAM208AQ9UK61 1670 aaKnown RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 MEGF11A6BM72 1044 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 AQP7O14520 342 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 RCAN2Q14206 197 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 LRRTM1Q86UE6 522 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 TPRA1Q86W33 373 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ARHGAP39Q9C0H5 1083 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 MCOLN1Q9GZU1 580 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 MTCP1P56278 107 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 TMEFF1Q8IYR6 380 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 OR7G3Q8NG95 312 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 OR9A4Q8NGU2 314 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 NT5DC2Q9H857 520 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 DNAJC15Q9Y5T4 150 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ZNF701M0R085 212 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 B4GALT3O60512 393 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 STC2O76061 302 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 NUDT1P36639 197 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 P2RY2P41231 377 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SOX4Q06945 474 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 OR1E3Q8WZA6 343 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 BTF3L4Q96K17 158 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SORT1Q99523 831 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 CDCP1Q9H5V8 836 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 DMRT3Q9NQL9 472 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 PISDQ9UG56 409 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 A0A0A6YYC8 382 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 I3L1I5 382 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 MAKP20794 623 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 AADACP22760 399 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 GSTO2Q9H4Y5 243 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 PTRH2Q9Y3E5 179 aaKnown RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 PVRP15151 417 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 GIPRP48546 466 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 HOXA1P49639 335 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 TMEM25Q86YD3 366 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ZC3HAV1LQ96H79 300 aaKnown RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 VRTNQ9H8Y1 702 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SLAMF8Q9P0V8 285 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 RIF1Q5UIP0 2472 aaKnown RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 SYT5O00445 386 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 UBL4AP11441 157 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 PKLRP30613 574 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 P2RX1P51575 399 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 CGB2Q6NT52 195 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 C17orf107Q6ZR85 190 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 CREB3L2Q70SY1 520 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms