RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ZNF16P17020 682 aaPredicted RBP15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 CRATP43155 626 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 COPZ1P61923 177 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 TUBA1BP68363 451 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 TUBA4AP68366 448 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 GTDC1Q4AE62 458 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 LIN52Q52LA3 116 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 HHATQ5VTY9 493 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 C1orf140Q5VVS0 124 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 TUBA1AQ71U36 451 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 SERPINA11Q86U17 422 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 ANKRD42Q8N9B4 389 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 GLB1L3Q8NCI6 653 aaPredicted RBP15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 C3orf49Q96BT1 292 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 SLC38A2Q96QD8 506 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 TAPBPLQ9BX59 468 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 TPT1P8Q9HAU6 139 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 PRDM4Q9UKN5 801 aa15.2■□□□□ 0.02
EXOSC4-201ENST00000316052 TMEM229AB2RXF0 380 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 SLC22A3O75751 556 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 BCHEP06276 602 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 H2AFXP16104 143 aaPredicted RBP15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 SERPINF1P36955 418 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 CRISP3P54108 245 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 DSTNP60981 165 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 HOXC5Q00444 222 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 PDCD4Q53EL6 469 aaKnown RBP15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 RNF220Q5VTB9 566 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 ANKRD16Q6P6B7 361 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 ABHD12BQ7Z5M8 362 aaPredicted RBP15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 KDM8Q8N371 416 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 ANKS4BQ8N8V4 417 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 VPS33AQ96AX1 596 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 TMEM19Q96HH6 336 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 FOXN4Q96NZ1 517 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 ALKBH3Q96Q83 286 aaPredicted RBP15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 RSPO3Q9BXY4 272 aaPredicted RBP15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 NELFAQ9H3P2 528 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 SEC61A2Q9H9S3 476 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 OBP2BQ9NPH6 170 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 CA10Q9NS85 328 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 THAP1Q9NVV9 213 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 ARGLU1Q9NWB6 273 aaPredicted RBP15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 CALML5Q9NZT1 146 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 RAB21Q9UL25 225 aa15.19■□□□□ 0.02
EXOSC4-201ENST00000316052 A0A096LPE4 126 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 A0A1W2PPZ6 126 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 SLC35F4A4IF30 521 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 TRPC5OSA6NMA1 111 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 FTCDNL1E5RQL4 147 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 ZNF587BE7ETH6 402 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 LMX1BO60663 402 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 VAMP5O95183 116 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 ZCCHC18P0CG32 403 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 NR4A2P43354 598 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 PDLIM4P50479 330 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 EGR4Q05215 589 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 GGTLC2Q14390 218 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 LARS2Q15031 903 aaKnown RBP15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 SLC9B1Q4ZJI4 515 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 PRAMEF8Q5VWM4 474 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 PRAMEF7Q5VXH5 474 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 NXNQ6DKJ4 435 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 NIPAL3Q6P499 406 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 PTDSS2Q9BVG9 487 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 PRR14Q9BWN1 585 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 SPATA9Q9BWV2 254 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 CRNNQ9UBG3 495 aaPredicted RBP15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 ZNF232Q9UNY5 417 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 RASD1Q9Y272 281 aa15.18■□□□□ 0.02
EXOSC4-201ENST00000316052 ARPC4-TTLL3A0A0A6YYG9 625 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 IGHV4-61A0A0C4DH41 118 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 A0A0G2JPF8 293 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 HNRNPCL2B2RXH8 293 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 HNRNPCL3B7ZW38 293 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 HNRNPCL1O60812 293 aaKnown RBP15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 ANP32DO95626 131 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 NUDT7P0C024 238 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 CECR9P0C854 216 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 HNRNPCL4P0DMR1 293 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 IDO1P14902 403 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 IGFBP5P24593 272 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 CALCRP30988 508 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 GZMKP49863 264 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 UBE2NP61088 152 aaKnown RBP15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 SNRPD2P62316 118 aaKnown RBP15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 NAAAQ02083 359 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 ADIPOQQ15848 244 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 KRTAP24-1Q3LI83 254 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 ATG16L1Q676U5 607 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 MAVSQ7Z434 540 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 OR9I1Q8NGQ6 314 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 MFSD8Q8NHS3 518 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 STK35Q8TDR2 534 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 SLC25A36Q96CQ1 311 aa15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 MSI2Q96DH6 328 aaKnown RBP15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 KTI12Q96EK9 354 aaPredicted RBP15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 MAELQ96JY0 434 aaKnown RBP15.17■□□□□ 0.02
EXOSC4-201ENST00000316052 VRK1Q99986 396 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms