RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ZAR1LA6NP61 321 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 RFPL4AL1F8VTS6 287 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 THBS1P07996 1170 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 CRABP1P29762 137 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 CCR8P51685 355 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 PRKXP51817 358 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 IKZF1Q13422 519 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 NFATC4Q14934 902 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 HNRNPA1L2Q32P51 320 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 IER5LQ5T953 404 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ARMC12Q5T9G4 340 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 HACD4Q5VWC8 232 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR2A2Q6IF42 318 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 CEACAM20Q6UY09 585 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 CDK20Q8IZL9 346 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 JAGN1Q8N5M9 183 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF649Q9BS31 505 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 TCEAL2Q9H3H9 227 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 HRASLSQ9HDD0 168 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 XIRP2A4UGR9 3374 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 KIF26AQ9ULI4 1882 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 F5P12259 2224 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 MANBAO00462 879 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ANXA5P08758 320 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 SLC35G4P0C7Q5 338 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 MRPL19P49406 292 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 MAT1AQ00266 395 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 TMEM196Q5HYL7 178 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 GLT6D1Q7Z4J2 308 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 C15orf54Q8N8G6 183 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 SETD7Q8WTS6 366 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 HSD17B8Q92506 261 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ARL15Q9NXU5 204 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 KLHL9Q9P2J3 617 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 AK6Q9Y3D8 172 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 MMACHCQ9Y4U1 282 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 TRBV4-1A0A0J9YWV2 114 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 NPC1O15118 1278 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 TGOLN2O43493 480 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF821O75541 412 aaPredicted RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 C6orf47O95873 294 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 H1F0P07305 194 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 LIPCP11150 499 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 EPORP19235 508 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 PPIAP62937 165 aaKnown RBP10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 SLC14A2Q15849 920 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF227Q86WZ6 799 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 SLC43A2Q8N370 569 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZCCHC10Q8TBK6 192 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 AKR1E2Q96JD6 320 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF354BQ96LW1 612 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 SHPKQ9UHJ6 478 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 CORO2BQ9UQ03 480 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 CACNA1CQ13936 2221 aa10.79□□□□□ -0.68
LDLRAD3-201ENST00000315571 DAPL1A0PJW8 107 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 ITGA10O75578 1167 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 CLDN9O95484 217 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SAGP10523 405 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 ADRB3P13945 408 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 HSD3B1P14060 373 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 TBXA2RP21731 343 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SRSF11Q05519 484 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR6K3Q8NGY3 331 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 HIST1H2BAQ96A08 127 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 NUDT4Q9NZJ9 180 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 OPN4Q9UHM6 478 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 EEF1E1-BLOC1S5C9J1V9 151 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 J3QLW9 94 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 K7EQS6 105 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 FGF1P05230 155 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SFTA3P0C7M3 94 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF19P17023 458 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 RAB5AP20339 215 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 ZNF84P51523 738 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 TPBGQ13641 420 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 NUMA1Q14980 2115 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 LINC00303Q3SY05 128 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 TMEM69Q5SWH9 247 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SPNS3Q6ZMD2 512 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 GLDNQ6ZMI3 551 aaPredicted RBP10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 CALHM3Q86XJ0 350 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 OR4K1Q8NGD4 311 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 BBS10Q8TAM1 723 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 RFKQ969G6 155 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SLC22A18Q96BI1 424 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SHDQ96IW2 340 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 SMOC1Q9H4F8 434 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 IL36AQ9UHA7 158 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 RNF215Q9Y6U7 377 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 FAM86C2PA6NEL3 165 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 HMSDA8MTL9 139 aa10.78□□□□□ -0.68
LDLRAD3-201ENST00000315571 FLRT2O43155 660 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms