RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 LIM2P55344 173 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 RAB5BP61020 215 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 Q6ZNB5 142 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 MED25Q71SY5 747 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SORCS2Q96PQ0 1159 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 PKMYT1Q99640 499 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 CHRDQ9H2X0 955 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 CCDC86Q9H6F5 360 aaKnown RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 NOX4Q9NPH5 578 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 FABP7O15540 132 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 GPX5O75715 221 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
SPAST-201ENST00000315285 TCRBP04435 133 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 FAM219BQ5XKK7 198 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 ACSM5Q6NUN0 579 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 BHLHA9Q7RTU4 235 aa12.76□□□□□ -0.37
SPAST-201ENST00000315285 SUSD5O60279 629 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 FAHD1Q6P587 224 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 TMEM185AQ8NFB2 350 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 OR4M1Q8NGD0 313 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 SLC6A17Q9H1V8 727 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 GALNT9Q9HCQ5 603 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 ATP13A2Q9NQ11 1180 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 HCRTR1O43613 425 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 TSPAN15O95858 294 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 CHRNB1P11230 501 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 BMP1P13497 986 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 SIAH3Q8IW03 269 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 FAM160A2Q8N612 972 aaPredicted RBP12.75□□□□□ -0.37
SPAST-201ENST00000315285 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 DUSP19Q8WTR2 217 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 RRNAD1Q96FB5 475 aaKnown RBP12.75□□□□□ -0.37
SPAST-201ENST00000315285 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 NTN4Q9HB63 628 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 REV1Q9UBZ9 1251 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 CAMK2AQ9UQM7 478 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 EFCAB7A8K855 629 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 ZFAND5O76080 213 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 CD14P08571 375 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 MAOAP21397 527 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 TUBG1P23258 451 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 EPHA2P29317 976 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 FCN2Q15485 313 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 COX15Q7KZN9 410 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 ANKRD33Q7Z3H0 272 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 WDR76Q9H967 626 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 DUSP22Q9NRW4 184 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 YARS2Q9Y2Z4 477 aaKnown RBP12.75□□□□□ -0.37
SPAST-201ENST00000315285 CTNSO60931 367 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 PRPH2P23942 346 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 CAV2P51636 162 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 TRMT12Q53H54 448 aaKnown RBP12.75□□□□□ -0.37
SPAST-201ENST00000315285 TCTN3Q6NUS6 607 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 TECPR1Q7Z6L1 1165 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 VN1R2Q8NFZ6 395 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 OR7G1Q8NGA0 311 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 FNDC9Q8TBE3 224 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 OR1E3Q8WZA6 343 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 GIMAP5Q96F15 307 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 FCRL1Q96LA6 429 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 ZNF578Q96N58 590 aaPredicted RBP12.75□□□□□ -0.37
SPAST-201ENST00000315285 ASB16Q96NS5 453 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 NUDT22Q9BRQ3 303 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 OR10A2Q9H208 303 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 SEMA6CQ9H3T2 930 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 IL21Q9HBE4 155 aa12.75□□□□□ -0.37
SPAST-201ENST00000315285 ZNF28P17035 718 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 TGFBR1P36897 503 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 FASLGP48023 281 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 PAQR6Q6TCH4 344 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 ZNF546Q86UE3 836 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 FAM109AQ8N4B1 249 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 PFN4Q8NHR9 129 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 SLC35B4Q969S0 331 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 LCORQ96JN0 433 aaPredicted RBP12.74□□□□□ -0.37
SPAST-201ENST00000315285 STACQ99469 402 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 DAPP1Q9UN19 280 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 PTRH2Q9Y3E5 179 aaKnown RBP12.74□□□□□ -0.37
SPAST-201ENST00000315285 NPFFR2Q9Y5X5 522 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 UTS2O95399 124 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 NID1P14543 1247 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 POLR2HP52434 150 aaKnown RBP12.74□□□□□ -0.37
SPAST-201ENST00000315285 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 SLC43A2Q8N370 569 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
SPAST-201ENST00000315285 IFNGR1P15260 489 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 TRHRP34981 398 aaPredicted RBP12.74□□□□□ -0.37
SPAST-201ENST00000315285 LCN10Q6JVE6 187 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 DHRS4L2Q6PKH6 230 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 PHYHIPQ92561 330 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 CNTNAP3BQ96NU0 1288 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 NIPAL2Q9H841 368 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
SPAST-201ENST00000315285 NDUFB11Q9NX14 153 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms