RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 MOB3CQ70IA8 216 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 A6NCN8 305 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SIX6O95475 246 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 C1orf105O95561 183 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ATP1B1P05026 303 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF28P17035 718 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 TACR1P25103 407 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CCR9P51686 369 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF266Q14584 549 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 LIPIQ6XZB0 460 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 BAGE2Q86Y30 109 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 TMEM130Q8N3G9 435 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 TTC9BQ8N6N2 239 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SLC38A5Q8WUX1 472 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 OR1E3Q8WZA6 343 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF75AQ96N20 296 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 CRB3Q9BUF7 120 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 ALG12Q9BV10 488 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PCDHGA5Q9Y5G8 931 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 SNX11Q9Y5W9 270 aa12.74□□□□□ -0.37
CLCN6-201ENST00000312413 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 SEMA4FO95754 770 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 HABP2Q14520 560 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 PIGMQ9H3S5 423 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 SUSD2Q9UGT4 822 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 OR2A25A4D2G3 310 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 FOXE1O00358 373 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 CATR1Q13166 79 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 C11orf91Q3C1V1 193 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 PAN3Q58A45 887 aaKnown RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 KCNG3Q8TAE7 436 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 PIGCQ92535 297 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ISG20Q96AZ6 181 aaKnown RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ADAMTS4O75173 837 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 OR7C1O76099 320 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 GPR75O95800 540 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 C1QBP02746 253 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.374e-7■■■■■ 32.6
CLCN6-201ENST00000312413 AADACL3Q5VUY0 350 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 FAM199XQ6PEV8 388 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 MBOAT2Q6ZWT7 520 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 FAM57BQ71RH2 274 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 RNF170Q96K19 258 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 CPEB1Q9BZB8 566 aaKnown RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 NSA2O95478 260 aaKnown RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ITGB7P26010 798 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 IMPA1P29218 277 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 TAGLN2P37802 199 aaKnown RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 MDGA2Q7Z553 956 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ARRDC2Q8TBH0 407 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 PHYHIPQ92561 330 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 DTD2Q96FN9 168 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 APOOQ9BUR5 198 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ADAM29Q9UKF5 820 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 WIF1Q9Y5W5 379 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF593O00488 134 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 HTR1FP30939 366 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 PCBD1P61457 104 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 RPE65Q16518 533 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ABHD17BQ5VST6 288 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 H3F3CQ6NXT2 135 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 ANKRD9Q96BM1 317 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-201ENST00000312413 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
CLCN6-201ENST00000312413 LRIT2A6NDA9 550 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 BET1O15155 118 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 CBX7O95931 251 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 APOA2P02652 100 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 ZDHHC11BP0C7U3 371 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 BMP1P13497 986 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 DPP4P27487 766 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 KIAA0141Q14154 515 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-201ENST00000312413 SHEQ5VZ18 495 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 ZNF765Q7L2R6 523 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 EID2Q8N6I1 236 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 OR52I1Q8NGK6 324 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 VN1R3Q9BXE9 311 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 IMPA2O14732 288 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
CLCN6-201ENST00000312413 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 IAH1Q2TAA2 248 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-201ENST00000312413 TBPL2Q6SJ96 375 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 TMUB2Q71RG4 321 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 OR5L1Q8NGL2 311 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 SCML1Q9UN30 329 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 KCNK5O95279 499 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 HLA-DOBP13765 273 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 SEC22CQ9BRL7 303 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 ARHGAP9Q9BRR9 750 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 HIF1ANQ9NWT6 349 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
CLCN6-201ENST00000312413 H0YIV9 168 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms