RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CPEP16870 476 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 RPL4P36578 427 aaKnown RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 HTR3AP46098 478 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 CLK1P49759 484 aaKnown RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 CLDN6P56747 220 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 EIF3IQ13347 325 aaKnown RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF791Q3KP31 576 aaPredicted RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 TIMM50Q3ZCQ8 353 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 GXYLT1Q4G148 440 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 OR2G6Q5TZ20 316 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 C5orf46Q6UWT4 87 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 NDUFAF7Q7L592 441 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 FAM122BQ7Z309 247 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 TIPARPQ7Z3E1 657 aaKnown RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 ADGRG3Q86Y34 549 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 ARMC10Q8N2F6 343 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 OR10G3Q8NGC4 313 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 OR52E2Q8NGJ4 325 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 OR52N1Q8NH53 320 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 MOSPD2Q8NHP6 518 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 STK35Q8TDR2 534 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 CT55Q8WUE5 264 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 TMEM234Q8WY98 164 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 TAAR8Q969N4 342 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 OTULINQ96BN8 352 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 DDOQ99489 341 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 PTDSS2Q9BVG9 487 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 OR51E2Q9H255 320 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 GALNT9Q9HCQ5 603 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 NDUFB11Q9NX14 153 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 ERVK13-1Q9NX77 482 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 TNFRSF10DQ9UBN6 386 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 ADAM18Q9Y3Q7 739 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 KIAA1549Q9HCM3 1950 aa10.77□□□□□ -0.69
TRIM40-205ENST00000307859 KNTC1P50748 2209 aa10.77□□□□□ -0.69
TRIM40-205ENST00000307859 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.69
TRIM40-205ENST00000307859 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TMEM72A0PK05 275 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ZC3H12DA2A288 527 aaKnown RBP10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SUSD5O60279 629 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SLC25A12O75746 678 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TXNDC12O95881 172 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 MT-CO3P00414 261 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 MT-ATP6P00846 226 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CELA2AP08217 269 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CD14P08571 375 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 PRKCAP17252 672 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 MSX1P28360 303 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 AQP2P41181 271 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SOX3P41225 446 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 RPS5P46782 204 aaKnown RBP10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TMEM81Q6P7N7 255 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 NANOGNBQ7Z5D8 188 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 PPP1R32Q7Z5V6 425 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 PHC2Q8IXK0 858 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 C10orf53Q8N6V4 93 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CYB561A3Q8NBI2 242 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SDR9C7Q8NEX9 313 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 OR51G2Q8NGK0 314 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 NACC2Q96BF6 587 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ZHX1-C8orf76Q96EF9 292 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SECISBP2Q96T21 854 aaKnown RBP10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TEAD3Q99594 435 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ARHGAP9Q9BRR9 750 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 KATNB1Q9BVA0 655 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 NDEL1Q9GZM8 345 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 INPP5EQ9NRR6 644 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 WDR70Q9NW82 654 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 KLRF1Q9NZS2 232 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 HRH3Q9Y5N1 445 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 WIF1Q9Y5W5 379 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 NSG1A0A0A6YYJ2 146 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 A8MVM7 634 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 IMPA2O14732 288 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ITGA10O75578 1167 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 INHBBP09529 407 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CLUP10909 449 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ATP6V1E1P36543 226 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TGFBR1P36897 503 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 CD79BP40259 229 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ERVK-25P63136 954 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TUBA1BP68363 451 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 RPL18Q07020 188 aaKnown RBP10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TPBGQ13641 420 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 GGTLC2Q14390 218 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 KLHL12Q53G59 568 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ALG10Q5BKT4 473 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 SLC25A53Q5H9E4 307 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 BICRALQ6AI39 1079 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 GDPGP1Q6ZNW5 385 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 LINC00299Q6ZSB3 139 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 USP43Q70EL4 1123 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 TUBA1AQ71U36 451 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 GLRX5Q86SX6 157 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 KLHL36Q8N4N3 616 aa10.76□□□□□ -0.69
TRIM40-205ENST00000307859 ACBD7Q8N6N7 88 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms