RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 MS4A15Q8N5U1 240 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 A0A1W2PR48 441 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 PAHP00439 452 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 LRRC37A5PQ49AS3 106 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 TMEM215Q68D42 235 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 SLC35D2Q76EJ3 337 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 MEPCEQ7L2J0 689 aaKnown RBP9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 GRINAQ7Z429 371 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 OR5AS1Q8N127 324 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 OR5J2Q8NH18 312 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 MED20Q9H944 212 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 FBXL4Q9UKA2 621 aa9.88□□□□□ -0.83
SYNPO2-201ENST00000307142 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 NUDT7P0C024 238 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 CHMP24386 653 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 GK3PQ14409 553 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 TUBA3EQ6PEY2 450 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 CMTM1Q8IZ96 169 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 OR8H1Q8NGG4 311 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ABHD4Q8TB40 342 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ZNF285Q96NJ3 590 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SLC25A18Q9H1K4 315 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ST14Q9Y5Y6 855 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PATE3B3GLJ2 98 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SORBS2O94875 1100 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PPA1Q15181 289 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 DUSP5Q16690 384 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 C1orf140Q5VVS0 124 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 KIAA1958Q8N8K9 716 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 NEURL3Q96EH8 262 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 F5P12259 2224 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SLC22A20A6NK97 555 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 GFYI3L273 518 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 FOLR1P15328 257 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ARSBP15848 533 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SLC16A11Q8NCK7 471 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 OR4K15Q8NH41 348 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 NDNFQ8TB73 568 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 TRUB1Q8WWH5 349 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 C22orf15Q8WYQ4 148 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 C11orf40Q8WZ69 217 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 RSPRY1Q96DX4 576 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 UCKL1Q9NWZ5 548 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 TRBV4-1A0A0J9YWV2 114 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PRAMEF4O60810 478 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 CD97P48960 835 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 UGT8Q16880 541 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 DPY19L4Q7Z388 723 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ST7LQ8TDW4 575 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PKMYT1Q99640 499 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 CHRNA9Q9UGM1 479 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 AK6Q9Y3D8 172 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PRAMEF27A3QJZ7 478 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 FGF17O60258 216 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PET100P0DJ07 73 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SEC61A1P61619 476 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 FAM53BQ14153 422 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SSPNQ14714 243 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 H1FNTQ75WM6 255 aaPredicted RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 LINC00346Q8IVM7 164 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 LINC00615Q96LM1 132 aaPredicted RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 TNFRSF13CQ96RJ3 184 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 SYNPO2LQ9H987 977 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 FKRPQ9H9S5 495 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 A4GALTQ9NPC4 353 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PRDM6Q9NQX0 595 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 GHRLQ9UBU3 117 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 A0A1B0GWA3 101 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ANKRD34BA5PLL1 514 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PCDH17O14917 1159 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 CBFA2T3O75081 653 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 NXPH2O95156 264 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 NXPH1P58417 271 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 RPS18P62269 152 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 KDM8Q8N371 416 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 PARP14Q460N5 1801 aa9.87□□□□□ -0.83
SYNPO2-201ENST00000307142 ARNTLO00327 626 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 CELA2BP08218 269 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 CD22P20273 847 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 STOMP27105 288 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 MTCP1P56278 107 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 SPOCK1Q08629 439 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 HES1Q14469 280 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 PGGHGQ32M88 737 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 TCTN3Q6NUS6 607 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 NPSR1Q6W5P4 371 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 DND1Q8IYX4 353 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 PAQR5Q9NXK6 330 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 SLAMF8Q9P0V8 285 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 B3GAT1Q9P2W7 334 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 TRAV17A0A0B4J275 112 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 KIAA0513O60268 411 aa9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 EIF4E2O60573 245 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 FKBP2P26885 142 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-201ENST00000307142 RPS23P62266 143 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms