RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZMYND19Q96E35 227 aaPredicted RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 C1GALT1C1Q96EU7 318 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 FBXL4Q9UKA2 621 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 WIF1Q9Y5W5 379 aa13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 EP300Q09472 2414 aaPredicted RBP13.17□□□□□ -0.3
SHCBP1-201ENST00000303383 TMEM72A0PK05 275 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 MT-ATP6P00846 226 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 CDK4P11802 303 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SOX6P35712 828 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SSR4P51571 173 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 GAS1P54826 345 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 NTRK2Q16620 822 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SOWAHCQ53LP3 525 aaPredicted RBP13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 HES3Q5TGS1 186 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 PRAMEF20Q5VT98 475 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 C5orf46Q6UWT4 87 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 RPS19BP1Q86WX3 136 aaKnown RBP13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 LSM14AQ8ND56 463 aaKnown RBP13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 OR11A1Q9GZK7 315 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 PTGES2Q9H7Z7 377 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 STUB1Q9UNE7 303 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 XKRYO14609 159 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SLC30A4O14863 429 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ASAH2BP0C7U1 165 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ICAM2P13598 275 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 C1QL3Q5VWW1 255 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF248Q8NDW4 579 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 MCFD2Q8NI22 146 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SPRYD4Q8WW59 207 aaPredicted RBP13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 PCDHGA3Q9Y5H0 932 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 TPPPO94811 219 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ENTPD1P49961 510 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 TRIP6Q15654 476 aaKnown RBP13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ESX1Q8N693 406 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 ZFP41Q8N8Y5 198 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 LIPHQ8WWY8 451 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SMPDL3BQ92485 455 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 HPF1Q9NWY4 346 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 PCDHGB7Q9Y5F8 929 aa13.16□□□□□ -0.3
SHCBP1-201ENST00000303383 RENP00797 406 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 SBK2P0C263 348 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 PRKCAP17252 672 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 APOBEC1P41238 236 aaKnown RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 ACTC1P68032 377 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 ACTA1P68133 377 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 LTBQ06643 244 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 MOGQ16653 247 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF362Q5T0B9 420 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 TMEM99Q8N816 258 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 OR5J2Q8NH18 312 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 OR52N1Q8NH53 320 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 DYNC2LI1Q8TCX1 351 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 CNN2Q99439 309 aaKnown RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 RNF167Q9H6Y7 350 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 NDUFB11Q9NX14 153 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 CAB39Q9Y376 341 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 IGHA1P01876 353 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 CELP19835 753 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 SDHAP31040 664 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 SSPNQ14714 243 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 ARSKQ6UWY0 536 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 TIPARPQ7Z3E1 657 aaKnown RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 KLBQ86Z14 1044 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 C6orf62Q9GZU0 229 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 INPP5EQ9NRR6 644 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 PLGP00747 810 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 CPEP16870 476 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 UGT2B10P36537 528 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 CASP3P42574 277 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 NUBP1P53384 320 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 KRR1Q13601 381 aaKnown RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 CRTC2Q53ET0 693 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 SLC6A19Q695T7 634 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 GDPGP1Q6ZNW5 385 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 ATCAYQ86WG3 371 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 SUMF1Q8NBK3 374 aa13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 GPX7Q96SL4 187 aaPredicted RBP13.15□□□□□ -0.3
SHCBP1-201ENST00000303383 H3BML4 177 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 BGLAPP02818 100 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 GRPRP30550 384 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 FOXF1Q12946 379 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 GPR139Q6DWJ6 353 aa13.14□□□□□ -0.31
SHCBP1-201ENST00000303383 MRPL48Q96GC5 212 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms