RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TM4SF18Q96CE8 201 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ARL6Q9H0F7 186 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF816-ZNF321PA0A0X1KG74 233 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 CRYM-AS1A6NIL9 109 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RFPL3O75679 317 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RASAL1O95294 804 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ALDOBP05062 364 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 MPLP40238 635 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 AKR1C8PQ5T2L2 129 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 KCTD20Q7Z5Y7 419 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF321PQ8N8H1 164 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 NR4A3Q92570 626 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 CHST8Q9H2A9 424 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 HHATLQ9HCP6 504 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 A0A1W2PQL4 384 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-201ENST00000303354 SERINC4A6NH21 518 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 IGHV3-13P01766 116 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 IGHV3-7P01780 117 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 CELA2BP08218 269 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-201ENST00000303354 UGT2B10P36537 528 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 ATP1B3P54709 279 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 LIM2P55344 173 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 MLF1P58340 268 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 OR8G1Q15617 311 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM196Q5HYL7 178 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 CMTM1Q8IZ96 169 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 C22orf15Q8WYQ4 148 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 SEC14L4Q9UDX3 406 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 FBXO4Q9UKT5 387 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 CXCL13O43927 109 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 GSTT2P0CG29 244 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 PCSK6P29122 969 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 AGTR1P30556 359 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 HLCSP50747 726 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 C17orf67Q0P5P2 114 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 SLC5A12Q1EHB4 618 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 FAM83FQ8NEG4 500 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-201ENST00000303354 ASB11Q8WXH4 323 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 INTS12Q96CB8 462 aaKnown RBP7.21□□□□□ -1.25
SCN9A-201ENST00000303354 C1GALT1Q9NS00 363 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 PCDHGA7Q9Y5G6 932 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 PRSS12P56730 875 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 SIX1Q15475 284 aaPredicted RBP7.21□□□□□ -1.25
SCN9A-201ENST00000303354 SPARTQ8N0X7 666 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 DTWD1Q8N5C7 304 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 MAFIPQ8WZ33 124 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 ASF1BQ9NVP2 202 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 CLEC5AQ9NY25 188 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 NDRG3Q9UGV2 375 aa7.21□□□□□ -1.25
SCN9A-201ENST00000303354 CACNG3O60359 315 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 OXSR1O95747 527 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 IFNA7P01567 189 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 MS4A2Q01362 244 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SCGB2A2Q13296 93 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 GDPD3Q7L5L3 318 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PIWIL3Q7Z3Z3 882 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SPRED2Q7Z698 418 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF595Q8IYB9 648 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SYT3Q9BQG1 590 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PROCRQ9UNN8 238 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 FAM96BQ9Y3D0 163 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM189-UBE2V1I3L0A0 370 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 RNASET2O00584 256 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 IMPA2O14732 288 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 RP2O75695 350 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PIGAP37287 484 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 EIF2DP41214 584 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 EIF5AP63241 154 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF534Q76KX8 674 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF511Q8NB15 262 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PGAP3Q96FM1 320 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SLC41A2Q96JW4 573 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SPACA5Q96QH8 159 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 C1orf198Q9H425 327 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 NKX6-3A6NJ46 265 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 MKRN2OSH3BPM6 223 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 RAB3DO95716 219 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF322Q6U7Q0 402 aaPredicted RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SGPP2Q8IWX5 399 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 B3GNT7Q8NFL0 401 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 CA5BP1Q8WTZ4 195 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 TMIGD2Q96BF3 282 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 SULT4A1Q9BR01 284 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 USP3Q9Y6I4 520 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 NCBP2LA6PVI3 153 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PHYHO14832 338 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 TAPBPO15533 448 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF718Q3SXZ3 478 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 MYOTQ9UBF9 498 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 NXT1Q9UKK6 140 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 NME7Q9Y5B8 376 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 TLCD2A6NGC4 264 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 NPPAP01160 153 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 CLDN15P56746 228 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PCBP3P57721 371 aaKnown RBP7.21□□□□□ -1.26
SCN9A-201ENST00000303354 FAM189A2Q15884 450 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 PRSS36Q5K4E3 855 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 ELP2Q6IA86 826 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 GLCCI1Q86VQ1 547 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM217Q8N7C4 229 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms