RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 KCNJ15Q99712 375 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 OR52D1Q9H346 318 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 C1orf198Q9H425 327 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 DUSP13Q9UII6 198 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 INTS6Q9UL03 887 aaKnown RBP9.69□□□□□ -0.86
CLIP1-201ENST00000302528 DNAJC15Q9Y5T4 150 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 TYROBPO43914 113 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 PCGF2P35227 344 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 AHRP35869 848 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 EMP3P54852 163 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 GTDC1Q4AE62 458 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 Q6ZRG5 221 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 OR10K1Q8NGX5 313 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 SEC22AQ96IW7 307 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 SEMA4CQ9C0C4 833 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 CBLCQ9ULV8 474 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 V9GYS6 101 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 METTL15A6NJ78 407 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ZFP92A6NM28 416 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 FAM72CH0Y354 149 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 K7ERQ8 282 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 FAM72AQ5TYM5 149 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 FAM72DQ6L9T8 149 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 C6orf89Q6UWU4 347 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 FAM72BQ86X60 149 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 OR10G3Q8NGC4 313 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 CLSTN3Q9BQT9 956 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM43Q9BTV4 400 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 STYXL1Q9Y6J8 313 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ARL2-SNX15V9GYD0 113 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ARFGEF2Q9Y6D5 1785 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 LRRC30A6NM36 301 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF487B1APH4 448 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 PHF1O43189 567 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-201ENST00000302528 SPINT2O43291 252 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 GALR3O60755 368 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-201ENST00000302528 PNPP00491 289 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 NUDT1P36639 197 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 HOXC5Q00444 222 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 SLC35D1Q9NTN3 355 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 CHRNA9Q9UGM1 479 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 ENPP5Q9UJA9 477 aa9.69□□□□□ -0.86
CLIP1-201ENST00000302528 CBY3A6NI87 242 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 PRAMEF4O60810 478 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 BMP1P13497 986 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 HMGCLP35914 325 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 DCTP40126 519 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SLC1A3P43003 542 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ERVPABLB-1P60509 514 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ILKQ13418 452 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SELPLGQ14242 412 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 RPL7L1Q6DKI1 246 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 AAED1Q7RTV5 226 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 PIWIL3Q7Z3Z3 882 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM200AQ86VY9 491 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 RNF141Q8WVD5 230 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF775Q96BV0 537 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SLC12A9Q9BXP2 914 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 DCAF16Q9NXF7 216 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SCML1Q9UN30 329 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 NOSIPQ9Y314 301 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 UGDHO60701 494 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 HMGN2P05204 90 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 APEHP13798 732 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 HTR6P50406 440 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 TATDN3Q17R31 274 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 APCDD1Q8J025 514 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 DCLRE1CQ96SD1 692 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SELENOIQ9C0D9 397 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 WRAP73Q9P2S5 460 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 RNASET2O00584 256 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ADAM12O43184 909 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 HLA-FP30511 346 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 P2RY2P41231 377 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 CLDN17P56750 224 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SH3BP2P78314 561 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SLC36A2Q495M3 483 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ADGRG5Q8IZF4 528 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 HSD17B11Q8NBQ5 300 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 OR13C9Q8NGT0 318 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 UCN3Q969E3 161 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF566Q969W8 418 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 GPR62Q9BZJ7 368 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 MRPL22Q9NWU5 206 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 OBP2AQ9NY56 170 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 STC2O76061 302 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 BMP2P12643 396 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 NTF3P20783 257 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 BLVRBP30043 206 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 HOXD12P35452 270 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SIRPAP78324 504 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 EXOSC7Q15024 291 aaKnown RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF468Q5VIY5 522 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-201ENST00000302528 SYT13Q7L8C5 426 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 MBOAT4Q96T53 435 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms