RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 OR14L1PQ8NHC6 308 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RSPRY1Q96DX4 576 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SEC22CQ9BRL7 303 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 DOCK5Q9H7D0 1870 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RTCAO00442 366 aaKnown RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 FCRLBQ6BAA4 426 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OR4D6Q8NGJ1 314 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 IL17FQ96PD4 163 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PKMYT1Q99640 499 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RBM24Q9BX46 236 aaKnown RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 IL20RAQ9UHF4 553 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RNF150Q9ULK6 438 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 F6UZH7 168 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 DDAH2O95865 285 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TBPP20226 339 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PRDX3P30048 256 aaKnown RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 FOLR3P41439 243 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TNFRSF17Q02223 184 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 BDH1Q02338 343 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RAB33AQ14088 237 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OTUD1Q5VV17 481 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 MDGA2Q7Z553 956 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF566Q969W8 418 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RNF170Q96K19 258 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ENKD1Q9H0I2 346 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NCDNQ9UBB6 729 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 A0A1B0GVG6 124 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM269A0A1B0GVZ9 245 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PIP5K1CO60331 668 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ATP1B1P05026 303 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 HMGN2P05204 90 aaKnown RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ADRB1P08588 477 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CCL5P13501 91 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ATPAF1Q5TC12 328 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 APCDD1Q8J025 514 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GCNT2Q8N0V5 402 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CYB561A3Q8NBI2 242 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OR4F15Q8NGB8 312 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CCNL2Q96S94 520 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 KDM4FA0A1W2PPD8 638 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ALX3O95076 343 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CD53P19397 219 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 HOXA11P31270 313 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CCR7P32248 378 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CD70P32970 193 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 HTR4Q13639 388 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CD163Q86VB7 1156 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PSMF1Q92530 271 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SLC6A18Q96N87 628 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GABARAPL3Q9BY60 117 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 EPHX3Q9H6B9 360 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 USP36Q9P275 1121 aaKnown RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TRAV27A0A087WT01 109 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GALR3O60755 368 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TCRBP04435 133 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TPMTP51580 245 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PITX1P78337 314 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GTDC1Q4AE62 458 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PELI3Q8N2H9 469 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 FRMD1Q8N878 549 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OR1E3Q8WZA6 343 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RELTQ969Z4 430 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TXNRD2Q9NNW7 524 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NECAP2Q9NVZ3 263 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CACFD1Q9UGQ2 172 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 F5H5K5 113 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 GABARAPH6UMI1 98 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF780AO75290 641 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 HCCSP53701 268 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CAMK2BQ13554 666 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM201Q5SNT2 666 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OR1J2Q8NGS2 313 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 MITD1Q8WV92 249 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 MOCOSQ96EN8 888 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 NKX6-2Q9C056 277 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 HIPK2Q9H2X6 1198 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CEBPZOSA8MTT3 80 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 BHLHE40O14503 412 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 FABP7O15540 132 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CALCBP10092 127 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 GRB2P62993 217 aaKnown RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SLAMF7Q9NQ25 335 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ADAMTSL3P82987 1691 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PRAMEF26H0Y7S4 382 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 GASTP01350 101 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PRPH2P23942 346 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PSMB3P49720 205 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SFRP5Q5T4F7 317 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF684Q5T5D7 378 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 VASNQ6EMK4 673 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 FCRLAQ7L513 359 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OR5AR1Q8NGP9 310 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 DUS3LQ96G46 650 aaKnown RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ALG12Q9BV10 488 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 C11orf54Q9H0W9 315 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SERTAD4Q9NUC0 356 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ANKRD36A6QL64 1941 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms