RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ZDHHC13Q8IUH4 622 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 KDM8Q8N371 416 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 SVOPLQ8N434 492 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 CBR4Q8N4T8 237 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 LINC00471Q8N535 108 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 OR8D4Q8NGM9 314 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 OR13C2Q8NGS9 318 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 MOSPD2Q8NHP6 518 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 ZNF417Q8TAU3 575 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 PIGXQ8TBF5 258 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 FAM57AQ8TBR7 257 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 GTPBP3Q969Y2 492 aaKnown RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 SARAFQ96BY9 339 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 SLC25A36Q96CQ1 311 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 ZNF587Q96SQ5 575 aaPredicted RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 KLHL4Q9C0H6 718 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 EXO5Q9H790 373 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 FKRPQ9H9S5 495 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 MCCC2Q9HCC0 563 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 FANCFQ9NPI8 374 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 MRPL39Q9NYK5 338 aaKnown RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 USE1Q9NZ43 259 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 CLCF1Q9UBD9 225 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 ZNF229Q9UJW7 825 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 FAM215AQ9Y5M1 114 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 SPIN1Q9Y657 262 aaPredicted RBP8.48□□□□□ -1.05
RFX3-201ENST00000302303 COL6A6A6NMZ7 2263 aa8.48□□□□□ -1.05
RFX3-201ENST00000302303 SVILO95425 2214 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 TRAV27A0A087WT01 109 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 AQP7P3A6NL99 342 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 GJE1A6NN92 205 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ZNF716A6NP11 495 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 EFCAB9A8MZ26 197 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 EI24O14681 340 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 BCKDKO14874 412 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 DNPH1O43598 174 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 OR2T1O43869 369 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 TOXO94900 526 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 HLA-DOBP13765 273 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ANXA8P13928 327 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 GCKP35557 465 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 EIF1AXP47813 144 aaKnown RBP8.47□□□□□ -1.05
RFX3-201ENST00000302303 OR2B6P58173 313 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ZP4Q12836 540 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 GUSBP1Q15486 140 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 LRRC36Q1X8D7 754 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 PAQR6Q6TCH4 344 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 GFRALQ6UXV0 394 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ZIC4Q8N9L1 334 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ST6GALNAC3Q8NDV1 305 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 FNDC9Q8TBE3 224 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 GNPDA2Q8TDQ7 276 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ROBO4Q8WZ75 1007 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 PLA2G12AQ9BZM1 189 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 NANSQ9NR45 359 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 ALKBH4Q9NXW9 302 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 IL20Q9NYY1 176 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 CAMK2AQ9UQM7 478 aa8.47□□□□□ -1.05
RFX3-201ENST00000302303 LOC102725191A0A1B0GVB3 256 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 CLCA1A8K7I4 914 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 AHRRA9YTQ3 701 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 B8ZZF3 427 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 SLC19A2O60779 497 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 ADAP00813 363 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 AQP2P41181 271 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 SLC35A1P78382 337 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 RPL18Q07020 188 aaKnown RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 COX10Q12887 443 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 MRPL49Q13405 166 aaKnown RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 DAG1Q14118 895 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 SLC17A1Q14916 467 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 PON3Q15166 354 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 TRIP10Q15642 601 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 IGFBP7Q16270 282 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 SGCBQ16585 318 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 ZBED5Q49AG3 693 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 ACSF3Q4G176 576 aaPredicted RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 ZNF362Q5T0B9 420 aaPredicted RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 WLSQ5T9L3 541 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 ABLIM2Q6H8Q1 611 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 RPTNQ6XPR3 784 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 ZNF620Q6ZNG0 422 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 RASSF6Q6ZTQ3 369 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 H1FNTQ75WM6 255 aaPredicted RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 RRM2BQ7LG56 351 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 MAMDC2Q7Z304 686 aaPredicted RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 CD163Q86VB7 1156 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 MARVELD2Q8N4S9 558 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 MEIOBQ8N635 442 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 SCAIQ8N9R8 606 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 ADPRHL1Q8NDY3 354 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 OR5J2Q8NH18 312 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 OR51A7Q8NH64 312 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 RNF128Q8TEB7 428 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 CPNE4Q96A23 557 aaPredicted RBP8.46□□□□□ -1.05
RFX3-201ENST00000302303 EGLN3Q9H6Z9 239 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 CHST11Q9NPF2 352 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 TMEM5Q9Y2B1 443 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms