RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CCL26Q9Y258 94 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DNAH14Q0VDD8 3507 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 PQLC2LA1A4F0 135 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 RFPL4AA6NLU0 287 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 RFPL4AL1F8VTS6 287 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 PSMD9O00233 223 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ERI3O43414 337 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 EPHB3P54753 998 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 EEF1A1P68104 462 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 MRPS10P82664 201 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 SLC9A5Q14940 896 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 MRM1Q6IN84 353 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DNM1P46Q6ZS02 220 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 SYS1Q8N2H4 156 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 LINC01555Q8NAE3 123 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 OR4C6Q8NH72 309 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 SLC2A12Q8TD20 617 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 C2CD4CQ8TF44 421 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ZNRF4Q8WWF5 429 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 TSPAN10Q9H1Z9 355 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 V9GY05 133 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 A0A1B0GW55 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ADRA2CP18825 462 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CSNK2A2P19784 350 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 PVALBP20472 110 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CERS1P27544 350 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CAPZA2P47755 286 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 KCNJ3P48549 501 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 NANOS3P60323 173 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 PPIAP62937 165 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 TNFRSF17Q02223 184 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 OR1Q1Q15612 314 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 FAM209BQ5JX69 171 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 MANEAQ5SRI9 462 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 YOD1Q5VVQ6 348 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 RPL22L1Q6P5R6 122 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 OR2W3Q7Z3T1 314 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ACOT4Q8N9L9 421 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ADAMTS15Q8TE58 950 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUSP19Q8WTR2 217 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 MIB2Q96AX9 1013 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 MOAP1Q96BY2 351 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 LINC00615Q96LM1 132 aaPredicted RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 CMSS1Q9BQ75 279 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ACTRT3Q9BYD9 372 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 USP36Q9P275 1121 aaKnown RBP9.99□□□□□ -0.81
ZNF558-201ENST00000301475 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 SLC23A2Q9UGH3 650 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF337Q9Y3M9 751 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 WDR45Q9Y484 360 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 OR10H1Q9Y4A9 318 aa9.99□□□□□ -0.81
ZNF558-201ENST00000301475 PRUNE2Q8WUY3 3088 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 PRR32B1ATL7 298 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CTNSO60931 367 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 RAB40ALP0C0E4 278 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 HIST1H1TP22492 207 aaPredicted RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 ITPKBP27987 946 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CD96P40200 585 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 RFC3P40938 356 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 ACTA2P62736 377 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 ACTG2P63267 376 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SLC7A9P82251 487 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 STX4Q12846 297 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 MPPED2Q15777 294 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 JMJD6Q6NYC1 403 aaPredicted RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SLC48A1Q6P1K1 146 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 ZNF546Q86UE3 836 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CRIPAKQ8N1N5 446 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 OR51S1Q8NGJ8 323 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 OR1S2Q8NGQ3 325 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SNX33Q8WV41 574 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 RAB40AQ8WXH6 277 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 OTUB2Q96DC9 234 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SYNPO2LQ9H987 977 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 TM7SF3Q9NS93 570 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CXXC1Q9P0U4 656 aaPredicted RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 IL36AQ9UHA7 158 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 ICAM5Q9UMF0 924 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 PCDHB10Q9UN67 800 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CACNA1CQ13936 2221 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 NPIPA5A0A0B4J1W7 369 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 OR6C68A6NDL8 312 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 MEIS3P1A6NDR6 274 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 NPIPA7E9PJI5 369 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 IMPA2O14732 288 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SMAD9O15198 467 aaKnown RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 CLEC3AO75596 197 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SLC25A12O75746 678 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 GLSO94925 669 aaPredicted RBP9.98□□□□□ -0.81
ZNF558-201ENST00000301475 NPIPA8P0DM63 369 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 SPP1P10451 314 aa9.98□□□□□ -0.81
ZNF558-201ENST00000301475 BCL6P41182 706 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms