RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 SPPL3Q8TCT6 385 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 CA5BQ9Y2D0 317 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 HLA-AP01891 365 aaKnown RBP17.89■□□□□ 0.45
TSR1-201ENST00000301364 MAOBP27338 520 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 EPHA2P29317 976 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 CCR9P51686 369 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 SQSTM1Q13501 440 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 DEFB133Q30KQ1 61 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 ZNF620Q6ZNG0 422 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 ABHD12BQ7Z5M8 362 aaPredicted RBP17.89■□□□□ 0.45
TSR1-201ENST00000301364 OPALINQ96PE5 141 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 SPIN2AQ99865 258 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 SPIN2BQ9BPZ2 258 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 SLC25A19Q9HC21 320 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 GON4LQ3T8J9 2241 aa17.89■□□□□ 0.45
TSR1-201ENST00000301364 A0A1W2PR48 441 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 PPP3CBP16298 524 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 GPLD1P80108 840 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 ZNF454Q8N9F8 522 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 PLEKHJ1Q9NW61 149 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 TMEM82A0PJX8 343 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 SULT2B1O00204 365 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 ZNF593O00488 134 aaPredicted RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 PIP5K1CO60331 668 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 GALR3O60755 368 aaPredicted RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 DPM1O60762 260 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 CD53P19397 219 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 TRHRP34981 398 aaPredicted RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 NDUFAF7Q7L592 441 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 STEAP2Q8NFT2 490 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 CUTCQ9NTM9 273 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 C19orf53Q9UNZ5 99 aaPredicted RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 MAKP20794 623 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 SF3B4Q15427 424 aaKnown RBP eCLIP17.88■□□□□ 0.457e-10■■■■□ 24.2
TSR1-201ENST00000301364 CAMKMTQ7Z624 323 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 OR14A16Q8NHC5 309 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 FANCFQ9NPI8 374 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 CTNSO60931 367 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 IFNA1P01562 189 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 C1QBP02746 253 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 ALKBH1Q13686 389 aaKnown RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 DUSP5Q16690 384 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 VASH1Q7L8A9 365 aaPredicted RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 CD163Q86VB7 1156 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 MMP21Q8N119 569 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 BCL7CQ8WUZ0 217 aaPredicted RBP17.88■□□□□ 0.45
TSR1-201ENST00000301364 SLC41A2Q96JW4 573 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 ST6GALNAC5Q9BVH7 336 aa17.88■□□□□ 0.45
TSR1-201ENST00000301364 ANKRD33BA6NCL7 494 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 F5H5K5 113 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 SEC14L5O43304 696 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 LIM2P55344 173 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 ARHGAP11BQ3KRB8 267 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 FAM160A2Q8N612 972 aaPredicted RBP17.87■□□□□ 0.45
TSR1-201ENST00000301364 WASH6PQ9NQA3 447 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 IGFBP1P08833 259 aaPredicted RBP17.87■□□□□ 0.45
TSR1-201ENST00000301364 BEND4Q6ZU67 534 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 DPY19L4Q7Z388 723 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 FNDC9Q8TBE3 224 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 NXPE3Q969Y0 559 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 KDM4EB2RXH2 506 aaPredicted RBP17.87■□□□□ 0.45
TSR1-201ENST00000301364 TNFRSF10AO00220 468 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 PAPLNO95428 1278 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 BDH1Q02338 343 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 KLHDC8BQ8IXV7 354 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 DUSP19Q8WTR2 217 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 SDF2Q99470 211 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 CA14Q9ULX7 337 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 DAPP1Q9UN19 280 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 IGHG1P01857 330 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 LCATP04180 440 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 BSGP35613 385 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 POU3F1Q03052 451 aaPredicted RBP17.87■□□□□ 0.45
TSR1-201ENST00000301364 TOMM40LQ969M1 308 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 OR52A5Q9H2C5 316 aa17.87■□□□□ 0.45
TSR1-201ENST00000301364 GLCEO94923 617 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 SRMP19623 302 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 PRKACBP22694 351 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 HTR2CP28335 458 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 TGFBR1P36897 503 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 XAF1Q6GPH4 301 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 ZNF585AQ6P3V2 769 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 CTRCQ99895 268 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 SLCO5A1Q9H2Y9 848 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 HINT3Q9NQE9 182 aaKnown RBP17.86■□□□□ 0.45
TSR1-201ENST00000301364 KCNS2Q9ULS6 477 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 A0A0A6YYH2 397 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 A6NJ64 397 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 FTCDNL1E5RQL4 147 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 CD38P28907 300 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 POLR2HP52434 150 aaKnown RBP17.86■□□□□ 0.45
TSR1-201ENST00000301364 ESCO2Q56NI9 601 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 PAQR6Q6TCH4 344 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 ZNF683Q8IZ20 524 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 HMGCLL1Q8TB92 370 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 LINC00615Q96LM1 132 aaPredicted RBP17.86■□□□□ 0.45
TSR1-201ENST00000301364 SAV1Q9H4B6 383 aaPredicted RBP17.86■□□□□ 0.45
TSR1-201ENST00000301364 CCDC86Q9H6F5 360 aaKnown RBP17.86■□□□□ 0.45
TSR1-201ENST00000301364 IL21Q9HBE4 155 aa17.86■□□□□ 0.45
TSR1-201ENST00000301364 CMC2Q9NRP2 79 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms