RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 EIF2B5Q13144 721 aaKnown RBP12.27□□□□□ -0.44
CASC4-201ENST00000299957 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.44
CASC4-201ENST00000299957 ZNF680Q8NEM1 530 aa12.27□□□□□ -0.44
CASC4-201ENST00000299957 SPACA5Q96QH8 159 aa12.27□□□□□ -0.44
CASC4-201ENST00000299957 MRPS2Q9Y399 296 aaKnown RBP12.27□□□□□ -0.44
CASC4-201ENST00000299957 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
CASC4-201ENST00000299957 LCTP09848 1927 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 MSL3P1P0C860 447 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 M6PRP20645 277 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 FRKP42685 505 aaPredicted RBP12.27□□□□□ -0.45
CASC4-201ENST00000299957 SNU13P55769 128 aaKnown RBP12.27□□□□□ -0.45
CASC4-201ENST00000299957 MELKQ14680 651 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 RIF1Q5UIP0 2472 aaKnown RBP12.27□□□□□ -0.45
CASC4-201ENST00000299957 LIPNQ5VXI9 398 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 OR2T4Q8NH00 348 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 PTDSS2Q9BVG9 487 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 UPB1Q9UBR1 384 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 SCP2D1Q9UJQ7 156 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 HTR3BO95264 441 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 ADRA2AP08913 450 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 ZNF28P17035 718 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 CXADRP78310 365 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 RPL13AP3Q6NVV1 102 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 ULK3Q6PHR2 472 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 PARM1Q6UWI2 310 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 OR5D18Q8NGL1 313 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 FAM71F1Q96KD3 344 aaPredicted RBP12.27□□□□□ -0.45
CASC4-201ENST00000299957 ZNF701Q9NV72 531 aaPredicted RBP12.27□□□□□ -0.45
CASC4-201ENST00000299957 CBLCQ9ULV8 474 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 DAPP1Q9UN19 280 aa12.27□□□□□ -0.45
CASC4-201ENST00000299957 ZNF646O15015 1829 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 NPC1O15118 1278 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 SLC2A1P11166 492 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 ATF1P18846 271 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 CFL1P23528 166 aaKnown RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 MAPK3P27361 379 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 SFTPDP35247 375 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 HMGA2P52926 109 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 ZP2Q05996 745 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 RNASE10Q5GAN6 216 aaKnown RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 COMTD1Q86VU5 262 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 MCATQ8IVS2 390 aaKnown RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 IQCF2Q8IXL9 164 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 CCDC107Q8WV48 283 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 NR4A3Q92570 626 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 GREB1Q4ZG55 1949 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 METTL21EPA6NDL7 271 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 KNG1P01042 644 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 H2BFMP0C1H6 154 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 GLI4P10075 376 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 SRMP19623 302 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 PRKAR1BP31321 381 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 MTNR1BP49286 362 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 MLF2Q15773 248 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.26□□□□□ -0.453e-6■■■■■ 26.9
CASC4-201ENST00000299957 METTL11BQ5VVY1 283 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 PDZD9Q8IXQ8 264 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 CMTM4Q8IZR5 234 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 FAM160A2Q8N612 972 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 OR13C3Q8NGS6 347 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 OR52N1Q8NH53 320 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 ACTR6Q9GZN1 396 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 NT5DC2Q9H857 520 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 ASF1BQ9NVP2 202 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 RBM7Q9Y580 266 aaKnown RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 WDR81Q562E7 1941 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 OLFM2O95897 454 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 RLN2P04090 185 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 NID1P14543 1247 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 PPP1CAP62136 330 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 RAB11BQ15907 218 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 SGCAQ16586 387 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 ESCO2Q56NI9 601 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 TMEM184AQ6ZMB5 413 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 SLC29A4Q7RTT9 530 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 KCTD20Q7Z5Y7 419 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 TMEM151BQ8IW70 566 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 MFSD9Q8NBP5 474 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 TSTD1Q8NFU3 115 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 GOT1L1Q8NHS2 421 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 SLC6A18Q96N87 628 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 WDR77Q9BQA1 342 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 G6PC3Q9BUM1 346 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 PRDM7Q9NQW5 492 aa12.26□□□□□ -0.45
CASC4-201ENST00000299957 VSX1Q9NZR4 365 aaPredicted RBP12.26□□□□□ -0.45
CASC4-201ENST00000299957 PRAMEF27A3QJZ7 478 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 UBL3O95164 117 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 GNRH1P01148 92 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 ZNF250P15622 560 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 HNRNPA2B1P22626 353 aaKnown RBP12.25□□□□□ -0.45
CASC4-201ENST00000299957 CCNOP22674 350 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 NRG3P56975 720 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 FAM74A1Q5RGS3 127 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 GLT8D1Q68CQ7 371 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 OR2AJ1Q8NGZ0 328 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 RSPRY1Q96DX4 576 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 MAP3K3Q99759 626 aa12.25□□□□□ -0.45
CASC4-201ENST00000299957 EPHX3Q9H6B9 360 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms