RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 H7C1C5 153 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 CLDN4O14493 209 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 ATP1B1P05026 303 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 ITPKBP27987 946 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 MAGEB1P43366 347 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 BLKP51451 505 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 PER3P56645 1201 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 OR12D2P58182 307 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 LCN6P62502 163 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 FOXK2Q01167 660 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 PLAURQ03405 335 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 ZNF124Q15973 351 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 VWA2Q5GFL6 755 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 KIRREL2Q6UWL6 708 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 LINC00471Q8N535 108 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 OR11H4Q8NGC9 324 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 OR51Q1Q8NH59 317 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 ST8SIA4Q92187 359 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 MARVELD3Q96A59 401 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 NARS2Q96I59 477 aaKnown RBP9.28□□□□□ -0.92
FOXN4-201ENST00000299162 TSSK2Q96PF2 358 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 KLHDC3Q9BQ90 382 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 KATNB1Q9BVA0 655 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 EMC3Q9P0I2 261 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 PFDN2Q9UHV9 154 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 POMT2Q9UKY4 750 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 HS3ST3A1Q9Y663 406 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 GVINP1Q7Z2Y8 2422 aa9.28□□□□□ -0.92
FOXN4-201ENST00000299162 TNRC18O15417 2968 aaPredicted RBP9.28□□□□□ -0.92
FOXN4-201ENST00000299162 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 RIIAD1A6NNX1 92 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 ST8SIA5O15466 376 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 FOXS1O43638 330 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 BRINP1O60477 761 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 AGR2O95994 175 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 CFDP00746 253 aaPredicted RBP9.27□□□□□ -0.92
FOXN4-201ENST00000299162 CD38P28907 300 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 RAB38P57729 211 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 MGAT2Q10469 447 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 DSG2Q14126 1118 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 TSSK4Q6SA08 328 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 C16orf47Q6ZP98 133 aaPredicted RBP9.27□□□□□ -0.92
FOXN4-201ENST00000299162 CDH26Q8IXH8 852 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 C9orf62Q8N4C0 152 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 DNAJA4Q8WW22 397 aaPredicted RBP9.27□□□□□ -0.92
FOXN4-201ENST00000299162 ADOQ96SZ5 270 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 LYRM4Q9HD34 91 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 KRCC1Q9NPI7 259 aaPredicted RBP9.27□□□□□ -0.92
FOXN4-201ENST00000299162 DIABLOQ9NR28 239 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 IER3IP1Q9Y5U9 82 aa9.27□□□□□ -0.92
FOXN4-201ENST00000299162 IGHV3-20A0A0C4DH32 117 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 C17orf105B2RV13 164 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 TMEM150CB9EJG8 249 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 SMAD9O15198 467 aaKnown RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 DCNP07585 359 aaKnown RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 PSMB10P40306 273 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 ERVK-25P63136 954 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 E2F1Q01094 437 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 CEBPEQ15744 281 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 FHL5Q5TD97 284 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 AADACL4Q5VUY2 407 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 CBLN3Q6UW01 205 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 NPSR1Q6W5P4 371 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 TCTE3Q8IZS6 198 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 GJD3Q8N144 294 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 ACBD7Q8N6N7 88 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 GDPD1Q8N9F7 314 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 PTP4A1Q93096 173 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 SLC25A46Q96AG3 418 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 C4orf36Q96KX1 117 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 ELF4Q99607 663 aaPredicted RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 RANBP3Q9H6Z4 567 aaPredicted RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 Q9N2J8 555 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 PLEKHB1Q9UF11 243 aaPredicted RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 MRPS33Q9Y291 106 aaKnown RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 GABRPO00591 440 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 LANCL1O43813 399 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 F13BP05160 661 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 CCR6P51684 374 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 ARFIP1P53367 373 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 HSD17B7P56937 341 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 OR10A3P58181 314 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 RIN1Q13671 783 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 AANATQ16613 207 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 C3orf38Q5JPI3 329 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF565Q8N9K5 539 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 RASD2Q96D21 266 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 NMNAT3Q96T66 252 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 TTYH1Q9H313 450 aaPredicted RBP9.27□□□□□ -0.93
FOXN4-201ENST00000299162 DUSP22Q9NRW4 184 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 B3GNT2Q9NY97 397 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 KLHL21Q9UJP4 597 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 TRAPPC4Q9Y296 219 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 HRH3Q9Y5N1 445 aa9.27□□□□□ -0.93
FOXN4-201ENST00000299162 IGHV1OR15-9A0A0B4J2B8 117 aa9.26□□□□□ -0.93
FOXN4-201ENST00000299162 RPP14O95059 124 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms